ggKbase home page

PLM3_60_coex_sep16_scaffold_3320_8

Organism: PLM3_60_coex_sep16_Actinobacteria_69_7

near complete RP 49 / 55 BSCG 49 / 51 MC: 2 ASCG 13 / 38
Location: 4434..5087

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family Tax=Sorangium cellulosum (strain So ce56) RepID=A9GYI9_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 37.7
  • Coverage: 199.0
  • Bit_score: 122
  • Evalue 3.70e-25
Transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 190.0
  • Bit_score: 129
  • Evalue 6.50e-28
Transcriptional regulator {ECO:0000313|EMBL:AHY45991.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 190.0
  • Bit_score: 129
  • Evalue 3.20e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubrobacter radiotolerans → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGTCAAGTCCGGACCTTGCCTACGGTGACCCGGAGACCCGGCGCCGGATCCTCCAGGCAACCTGGGGACTCATCGAAGAGCGCGGCGCGAGCATCAGGCTCGTCGATGCCGCCGACCGAGCCGGAGTGTCGCGCCAGACGGTCTACCTCCACTTCGGCGACCGGGCCGGCTTGCTTCTCGCCCTCGTCGCTTACATGCCCGAGGCCCTGGGGTTCCAAGAGCTCTTCGACTATGTCTTCGACGCGCCCACAGGAGCTGAGATGTTGCAGCGGGCGGTGGAGGTGCACAGCACCTACAGCGCGAAGATCGACTCGGTCGCCCAGGTCCTCGAAGCCGCCCAGTACCGAGACAATGCTCTGGGAGCAGCCTGGAGGGATCGGATGGACCGCAGCAGAGTCGCCCATCGGGCGATCATCCAGCGCATCGCCGACGATGGCCAGCTCGCCGATGGCTGGACCGTGGACGCGGCTGCGGACCTGTTCTACACGGTCACCATGCAAGGACCGTGGCGTGAGCTCACCCGAGAACTCGGTTGGACGCCCGAACAGTACGTGGAGAACATGCTCAGGCTGCTTCGACGCAGCCTCTTGGCGGGGCGAGAGCCTCCCGAAGCAGGTCGATTCCCTTCACTTACCCTCTCGCCGAGCGACTAG
PROTEIN sequence
Length: 218
MSSPDLAYGDPETRRRILQATWGLIEERGASIRLVDAADRAGVSRQTVYLHFGDRAGLLLALVAYMPEALGFQELFDYVFDAPTGAEMLQRAVEVHSTYSAKIDSVAQVLEAAQYRDNALGAAWRDRMDRSRVAHRAIIQRIADDGQLADGWTVDAAADLFYTVTMQGPWRELTRELGWTPEQYVENMLRLLRRSLLAGREPPEAGRFPSLTLSPSD*