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PLM3_60_coex_sep16_scaffold_3333_7

Organism: PLM3_60_coex_sep16_Actinobacteria_69_7

near complete RP 49 / 55 BSCG 49 / 51 MC: 2 ASCG 13 / 38
Location: 5279..5860

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase ECF-subfamily sigma factor Tax=Patulibacter medicamentivorans RepID=H0E2N3_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 176.0
  • Bit_score: 139
  • Evalue 3.40e-30
Putative RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:EHN12047.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 176.0
  • Bit_score: 139
  • Evalue 4.70e-30
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 188.0
  • Bit_score: 133
  • Evalue 4.00e-29

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Taxonomy

Patulibacter medicamentivorans → Patulibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGGACGAGGGACAGGACGACGTCGAGCTGATCGTCCGCTCGCGGGATGAGCCCGAGGCGTTCGGGGTGCTGTTCGAACGCCATGCCGGGACGCTGCTCGGGTACTTCGCTCGCCGGACGCTCGACCCCGAGGCGGCGGCGGAGCTCGTGGCCGAGACGTTCGCGCAGGCGTTCGCGTCGCGGAGGCGGTTCCGCGACAAGGGACTCGGCGCCACCGGGTGGCTGTACGGGATCGCCCGGCACCAGCTGTCCCGATTCTTCCGGAACGGCACCGTGGACAAGCGGGCCCGCCGCCGGCTCGGGATGCCCGAGCGCGACGTCTCGTCGCAGGACTACGAGCGGATCGAGGAGCTGATCGACTTCGAACGGATCGGACGGGCGATCGCGCAGGCGTTCGCCCTCCTATCCGAGGAGCAACGCGATGCCCTCACGCTTCGGGTGATCGAGGGTCGGCCATACCAGGAGGTAGCCGAGGCGCTTCGGTGCACGGAGGAGACCGCCCGGGCTCGGGTGAGTCGAGGTCTGAAGCGGCTCGCCACGACGATCGACCGGACCGAGCTGGAGAGCGAACGAGGGAGCTGA
PROTEIN sequence
Length: 194
MDEGQDDVELIVRSRDEPEAFGVLFERHAGTLLGYFARRTLDPEAAAELVAETFAQAFASRRRFRDKGLGATGWLYGIARHQLSRFFRNGTVDKRARRRLGMPERDVSSQDYERIEELIDFERIGRAIAQAFALLSEEQRDALTLRVIEGRPYQEVAEALRCTEETARARVSRGLKRLATTIDRTELESERGS*