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PLM3_60_coex_sep16_scaffold_3333

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3333_1
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(3..491)
DNA (489bp) protein (163aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivorans DSM 12260.;"
Aspartate-semialdehyde dehydrogenase Tax=Aminomonas paucivorans DSM 12260 RepID=E3CV47_9BACT
aspartate-semialdehyde dehydrogenase
PLM3_60_coex_sep16_scaffold_3333_2
unknown

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comp(491..1129)
DNA (639bp) protein (213aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3333_3
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1180..2421)
DNA (1242bp) protein (414aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
Aspartokinase Tax=Frankia sp. (strain EAN1pec) RepID=A8KYC0_FRASN
aspartate kinase
PLM3_60_coex_sep16_scaffold_3333_4
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2468..3127)
DNA (660bp) protein (220aa)
peptidase S9 Tax=Streptomyces sp. Amel2xE9 RepID=UPI00036FB13A
Peptidase {ECO:0000313|EMBL:EDY57638.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
peptidase S9 prolyl oligopeptidase active site domain-containing protein
PLM3_60_coex_sep16_scaffold_3333_5
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3127..4464)
DNA (1338bp) protein (446aa)
hypothetical protein Tax=Actinomadura flavalba RepID=UPI0003666B73
Peptidase S9 {ECO:0000313|EMBL:ETK31149.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
peptidase S9 prolyl oligopeptidase active site domain-containing protein
PLM3_60_coex_sep16_scaffold_3333_6
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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comp(4487..5203)
DNA (717bp) protein (239aa)
hypothetical protein Tax=Streptomyces sp. CNS615 RepID=UPI00037631B1
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3_60_coex_sep16_scaffold_3333_7
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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5279..5860
DNA (582bp) protein (194aa)
Putative RNA polymerase ECF-subfamily sigma factor Tax=Patulibacter medicamentivorans RepID=H0E2N3_9ACTN
Putative RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:EHN12047.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
ECF subfamily RNA polymerase sigma-24 subunit
PLM3_60_coex_sep16_scaffold_3333_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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5862..6875
DNA (1014bp) protein (338aa)
Uncharacterized protein Tax=Frankia sp. EUN1f RepID=D3D7Y1_9ACTO
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3333_9
Streptomyces sp. MNU77, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6877..7470)
DNA (594bp) protein (198aa)
Recombination protein RecR Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=RECR_ACIC1
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MNU77.;"
recR; recombination protein RecR
PLM3_60_coex_sep16_scaffold_3333_10
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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comp(7471..9327)
DNA (1857bp) protein (619aa)
DNA polymerase III subunits gamma/tau (EC:2.7.7.7)
DNA polymerase III subunit gamma/tau Tax=Salinispora pacifica RepID=UPI000375022B
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM3_60_coex_sep16_scaffold_3333_11
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9696..10421)
DNA (726bp) protein (242aa)
Uncharacterized protein Tax=Nocardioides sp. CF8 RepID=R7XY72_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON23965.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
sulfite exporter TauE/SafE family protein
PLM3_60_coex_sep16_scaffold_3333_12
unknown

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comp(10425..11210)
DNA (786bp) protein (262aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3333_13
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

11301..11999
DNA (699bp) protein (233aa)
Putative phosphoserine phosphatase Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67N61_SYMTH
phosphoserine phosphatase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3_60_coex_sep16_scaffold_3333_trna_2
unknown

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comp(12025..12111)
DNA (87bp)
transferRNA Ser
PLM3_60_coex_sep16_scaffold_3333_trna_1
unknown

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comp(12239..12328)
DNA (90bp)
transferRNA Ser
PLM3_60_coex_sep16_scaffold_3333_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12405..12818
DNA (414bp) protein (138aa)
Transcriptional regulator, Crp/Fnr family bin=GWC2_Chloroflexi_73_18 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3_60_coex_sep16_scaffold_3333_15
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(12835..13089)
DNA (255bp) protein (85aa)
cytidine deaminase Tax=Frankia sp. Iso899 RepID=UPI0003B44A75
zinc-binding CMP/dCMP deaminase
Tax=BJP_08E140C01_Actinomycetales_67_18
Displaying 17 items

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