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PLM3_60_coex_sep16_scaffold_12137

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_12137_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(1..807)
DNA (807bp) protein (269aa)
putative Branched-chain amino acid ABC transporter (permease protein); livH-like protein bin=bin7_NC10_sister species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
branched-chain amino acid ABC superfamily ATP binding cassette transporter
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_12137_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(771..2039)
DNA (1269bp) protein (423aa)
putative Leu/Ile/Val-binding protein homolog 8 bin=bin7_NC10_sister species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
putative Leu/Ile/Val-binding protein homolog 8
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_12137_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2151..2696
DNA (546bp) protein (182aa)
hypothetical protein bin=bin7_NC10_sister species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
NUDIX hydrolase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_12137_4
unknown

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3104..3208
DNA (105bp) protein (35aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_12137_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3220..3654)
DNA (435bp) protein (145aa)
Acyl dehydratase bin=GWF2_Methylomirabilis_70_14 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MaoC-like dehydratase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_12137_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3651..4106)
DNA (456bp) protein (152aa)
MaoC-like dehydratase bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MaoC-like dehydratase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_12137_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4106..4315)
DNA (210bp) protein (70aa)
Thioesterase superfamily protein bin=GWF2_Methylomirabilis_70_14 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_12137_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(4273..4554)
DNA (282bp) protein (94aa)
thioesterase family protein bin=bin7_NC10_sister species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_12137_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4567..4968)
DNA (402bp) protein (134aa)
Putative membrane protein bin=GWC2_Methylomirabilis_70_16 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 9 items

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