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PLM3_60_coex_sep16_scaffold_12814

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_12814_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(1..540)
DNA (540bp) protein (180aa)
Putative transmembrane sensor domain protein bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cyaA; adenylate cyclase 1
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_12814_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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600..1373
DNA (774bp) protein (258aa)
Putative beta-lactamase-like protein bin=GWA2_Methylomirabilis_73_35 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
beta-lactamase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_12814_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(1361..1837)
DNA (477bp) protein (159aa)
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein bin=bin7_NC10_sister species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_12814_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(2390..3556)
DNA (1167bp) protein (389aa)
major facilitator superfamily transporter bin=bin7_NC10_sister species=Advenella kashmirensis genus=Advenella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
major facilitator superfamily MFS-1 transporter
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_12814_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(3591..4670)
DNA (1080bp) protein (360aa)
GAF/GGDEF domain-containing protein bin=GWA2_Methylomirabilis_73_35 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GAF/GGDEF domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_12814_6
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4792..5250)
DNA (459bp) protein (153aa)
PAS/PAC sensor hybrid histidine kinase Tax=Burkholderia cenocepacia RepID=A0B0D5_BURCH
multi-sensor hybrid histidine kinase
Histidine kinase {ECO:0000313|EMBL:KGY53537.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
PLM3_60_coex_sep16_scaffold_12814_7
unknown

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comp(5262..5657)
DNA (396bp) protein (132aa)

This feature has no annotations

Displaying 7 items

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