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PLM3_60_coex_sep16_scaffold_18698

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_18698_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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169..1425
DNA (1257bp) protein (419aa)
Extracellular ligand-binding receptor bin=GWC2_Methylomirabilis_70_24 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
branched-chain amino acid ABC transporter substrate-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_18698_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1502..2374
DNA (873bp) protein (291aa)
Putative branched-chain amino acid ABC transporter permease component bin=GWC2_Methylomirabilis_70_24 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
livM; branched-chain amino acid ABC transporter permease
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_18698_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2590..3375
DNA (786bp) protein (262aa)
Branched-chain amino acid transport system permease protein LivM bin=GWC2_Methylomirabilis_70_16 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
livH; branched chain amino acid ABC transporter permease
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_coex_sep16_scaffold_18698_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3375..4100
DNA (726bp) protein (242aa)
Putative branched-chain amino acid ABC transporter ATP-binding component bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livG; branched-chain amino acid ABC transporter ATP-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_18698_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4090..4821
DNA (732bp) protein (244aa)
Branched-chain amino acid transport ATP-binding protein LivF bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livF; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_18698_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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5133..6251
DNA (1119bp) protein (373aa)
Amidohydrolase Tax=Prochloron didemni P1-Palau RepID=G0XS52_PRODI
Uncharacterized protein {ECO:0000313|EMBL:ETW94082.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
TIM-barrel fold metal-dependent hydrolase
PLM3_60_coex_sep16_scaffold_18698_7
Smithella sp. SC_K08D17, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6292..6612)
DNA (321bp) protein (107aa)
Putative uncharacterized protein Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NWX0_CHRVO
Uncharacterized protein {ECO:0000313|EMBL:KIE18292.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SC_K08D17.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_18698_8
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6649..7542)
DNA (894bp) protein (298aa)
Uncharacterized protein {ECO:0000313|EMBL:KFO67333.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCADC.;"
PLM3_60_coex_sep16_scaffold_18698_9
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7666..8067)
DNA (402bp) protein (134aa)
Acid phosphatase Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZA06_AZOL4
acid phosphatase
5-nucleotide phosphatase {ECO:0000313|EMBL:KJR63345.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
Displaying 9 items

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