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PLM3_60_coex_sep16_scaffold_3003

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3003_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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146..745
DNA (600bp) protein (200aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_3003_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

759..2408
DNA (1650bp) protein (550aa)
ggt; gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_3003_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2421..3125
DNA (705bp) protein (235aa)
hypothetical protein Tax=Variovorax paradoxus RepID=UPI00035D0C50
putative esterase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_60_coex_sep16_scaffold_3003_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3158..3469
DNA (312bp) protein (104aa)
id=3824559 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_3003_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3466..4161
DNA (696bp) protein (232aa)
Methylase bin=GWA2_Methylomirabilis_73_35 species=Methanothermobacter marburgensis genus=Methanothermobacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methyltransferase related protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_3003_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4158..4898
DNA (741bp) protein (247aa)
YdjC-like protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
chbG; hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_3003_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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4958..7057
DNA (2100bp) protein (700aa)
hypothetical protein Tax=Limnohabitans sp. Rim28 RepID=UPI0002E1351B
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3_60_coex_sep16_scaffold_3003_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7088..8074
DNA (987bp) protein (329aa)
transcriptional repressor; K00845 glucokinase [EC:2.7.1.2] bin=bin7_NC10_sister species=Shinella zoogloeoides genus=Shinella taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
transcriptional regulator/sugar kinase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_3003_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8071..9126
DNA (1056bp) protein (352aa)
Alcohol dehydrogenase GroES domain protein bin=GWC2_Methylomirabilis_70_16 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
alcohol dehydrogenase GroES domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_3003_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9128..9529)
DNA (402bp) protein (134aa)
Thiol-disulfide isomerase and thioredoxins bin=GWF2_Methylomirabilis_70_14 species=Magnetospirillum sp. SO-1 genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
resA; thiol-disulfide oxidoreductase resA
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_3003_11
unknown

Not on your lists

9563..9859
DNA (297bp) protein (99aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3003_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9870..12803
DNA (2934bp) protein (978aa)
Glr3436 protein bin=GWF2_Methylomirabilis_70_14 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_3003_13
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

12803..14005
DNA (1203bp) protein (401aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI00034D573C
cytochrome p450
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3_60_coex_sep16_scaffold_3003_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14041..14658)
DNA (618bp) protein (206aa)
Fructose-2,6-bisphosphatase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WMR5_9BURK
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_3003_15
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14881..16602
DNA (1722bp) protein (574aa)
Dyp-type peroxidase family Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K5Y4_SACES
Uncharacterized protein {ECO:0000313|EMBL:KFG01278.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
Dyp-type peroxidase family
PLM3_60_coex_sep16_scaffold_3003_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16578..18311)
DNA (1734bp) protein (578aa)
TPR repeat-containing adenylate/guanylate cyclase bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
adenylate/guanylate cyclase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 16 items

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