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PLM3_60_coex_sep16_scaffold_3299

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3299_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3..530
DNA (528bp) protein (176aa)
Integrase, catalytic region Tax=Magnetococcus sp. (strain MC-1) RepID=A0LBL4_MAGSM
integrase catalytic subunit
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_3299_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(652..1575)
DNA (924bp) protein (308aa)
glk; glucokinase (Glucose kinase) (EC:2.7.1.2) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
glk; glucokinase (Glucose kinase) (EC:2.7.1.2)
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_3299_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(1572..2501)
DNA (930bp) protein (310aa)
fbaB; fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase class I bin=GWA2_Methylomirabilis_73_35 species=Chamaesiphon minutus genus=Chamaesiphon taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_3299_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(2521..3192)
DNA (672bp) protein (224aa)
cbbF; D-fructose-1,6-bisphosphatase protein (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855, ECO:0000313|EMBL:CBE69213.1};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Fructose-1,6-bisphosphatase class 1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHI1_9BACT
PLM3_60_coex_sep16_scaffold_3299_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3189..5822)
DNA (2634bp) protein (878aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_3299_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5998..6924
DNA (927bp) protein (309aa)
Binding-protein-dependent transport systems inner membrane component bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport system inner membrane protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_coex_sep16_scaffold_3299_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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6893..7852
DNA (960bp) protein (320aa)
Binding-protein-dependent transport systems inner membrane component bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport system inner membrane protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_coex_sep16_scaffold_3299_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7876..9621
DNA (1746bp) protein (582aa)
Oligopeptide ABC transporter periplasmic oligopeptide-binding protein bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 5 extracellular solute-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_3299_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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9703..10917
DNA (1215bp) protein (405aa)
diguanylate cyclase bin=bin7_NC10_sister species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Conserved protein of unknown function (membrane protein with a C-terminal Diguanylate cyclase domain)
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_3299_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(11901..12887)
DNA (987bp) protein (329aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 10 items

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