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PLM3_60_coex_sep16_scaffold_3406

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3406_1
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(1..837)
DNA (837bp) protein (279aa)
acyl-CoA transferase (EC:2.8.3.16)
CoA-transferase family III family protein 30 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE9AB
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3_60_coex_sep16_scaffold_3406_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(842..1966)
DNA (1125bp) protein (375aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036A6BD4
Uncharacterized protein {ECO:0000313|EMBL:ETW97997.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
acyl-CoA dehydrogenase domain-containing protein
PLM3_60_coex_sep16_scaffold_3406_3
Burkholderia thailandensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1980..2312)
DNA (333bp) protein (111aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia thailandensis.;"
Carboxymuconolactone decarboxylase Tax=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) RepID=Q2T8D9_BURTA
alkylhydroperoxidase AhpD family core domain protein
PLM3_60_coex_sep16_scaffold_3406_4
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2372..3160)
DNA (789bp) protein (263aa)
crotonase Tax=Acidovorax radicis RepID=UPI00023765D1
Uncharacterized protein {ECO:0000313|EMBL:ETX03931.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
enoyl-CoA hydratase
PLM3_60_coex_sep16_scaffold_3406_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3201..4433)
DNA (1233bp) protein (411aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003724ACE
Uncharacterized protein {ECO:0000313|EMBL:ETW97996.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
acyl-CoA dehydrogenase
PLM3_60_coex_sep16_scaffold_3406_6
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(4499..7339)
DNA (2841bp) protein (947aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3) bin=bin8_Chloro species=Thioalkalivibrio sp. ALSr1 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
PAS sensor protein
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_3406_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(7387..8181)
DNA (795bp) protein (265aa)
Import inner membrane translocase subunit Tim44 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transporter
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_3406_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(8250..8507)
DNA (258bp) protein (86aa)
id=2556868 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_coex_sep16_scaffold_3406_9
unknown

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comp(8598..8819)
DNA (222bp) protein (74aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3406_10
unknown

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comp(8940..9104)
DNA (165bp) protein (55aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3406_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9101..9805)
DNA (705bp) protein (235aa)
Putative fatty acid desaturase bin=GWC2_Methylomirabilis_70_24 species=uncultured marine microorganism HF4000_APKG10H12 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
aminotransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_3406_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9884..10537)
DNA (654bp) protein (218aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036283F3
cyclic nucleotide-binding domain-containing protein
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ABE63317.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
PLM3_60_coex_sep16_scaffold_3406_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10560..11942)
DNA (1383bp) protein (461aa)
Amidase (EC:3.5.1.4)
Glutamyl-tRNA(Gln) amidotransferase subunit A bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_3406_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11935..12129)
DNA (195bp) protein (65aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_3406_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12191..13459)
DNA (1269bp) protein (423aa)
Phenylacetate-CoA ligase bin=GWC2_Methylomirabilis_70_24 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
paaK; phenylacetate-CoA ligase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_3406_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13464..14726)
DNA (1263bp) protein (421aa)
Benzoate-CoA ligase family Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KMS4_9FIRM
benzoate-CoA ligase family
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_3406_17
unknown

Not on your lists

15047..15202
DNA (156bp) protein (52aa)

This feature has no annotations

Displaying 17 items

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