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PLM3_60_coex_sep16_scaffold_3616

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3616_1
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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3..425
DNA (423bp) protein (141aa)
ATPase Tax=Deinococcus sp. 2009 RepID=UPI0003B5BF4F
histidine kinase
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_60_coex_sep16_scaffold_3616_2
unknown

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comp(467..748)
DNA (282bp) protein (94aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3616_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(819..1196)
DNA (378bp) protein (126aa)
Thioesterase superfamily protein bin=GWA2_Methylomirabilis_73_35 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phenylacetic acid degradation-related protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_3616_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1239..2705)
DNA (1467bp) protein (489aa)
Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_3616_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2758..3795
DNA (1038bp) protein (346aa)
Uroporphyrinogen decarboxylase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_3616_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3792..4796
DNA (1005bp) protein (335aa)
ferrochelatase (EC:4.99.1.1)
Ferrochelatase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_3616_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4845..6248
DNA (1404bp) protein (468aa)
Protoporphyrinogen oxidase bin=GWA2_Methylomirabilis_73_35 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
protoporphyrinogen IX and coproporphyrinogen III oxidase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_3616_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6296..6544
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Rhodovulum sp. PH10 RepID=J6UCF8_9RHOB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_60_coex_sep16_scaffold_3616_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6541..6966
DNA (426bp) protein (142aa)
Ribonuclease VapC Tax=Rhodovulum sp. PH10 RepID=J6LAU1_9RHOB
PIN domain protein family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_60_coex_sep16_scaffold_3616_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(6980..7246)
DNA (267bp) protein (89aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_3616_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7255..8469)
DNA (1215bp) protein (405aa)
CoA-transferase III family protein bin=GWA2_Methylomirabilis_73_35 species=Kosakonia radicincitans genus=Kosakonia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Formyl-CoA transferase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_3616_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

8569..9522
DNA (954bp) protein (318aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036B7DC9
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_3616_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9501..9722
DNA (222bp) protein (74aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_3616_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

9719..10321
DNA (603bp) protein (201aa)
amino acid transporter bin=bin7_NC10_sister species=Streptomyces cattleya genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
Amino acid transporter
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying 14 items

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