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PLM3_60_coex_sep16_scaffold_3617

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3617_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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1..426
DNA (426bp) protein (142aa)
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
sucC; succinyl-CoA synthetase subunit beta
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_3617_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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423..1295
DNA (873bp) protein (291aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
succinyl-CoA synthetase, alpha subunit
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_3617_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1292..1714
DNA (423bp) protein (141aa)
ndk; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase (EC:2.7.4.6)
Nucleoside diphosphate kinase bin=GWC2_Methylomirabilis_70_16 species=Acidithiobacillus caldus genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_3617_4
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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1754..2710
DNA (957bp) protein (319aa)
Uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM3_60_coex_sep16_scaffold_3617_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2713..4575
DNA (1863bp) protein (621aa)
Asparagine synthetase bin=GWC2_Methylomirabilis_70_16 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
asparagine synthase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_coex_sep16_scaffold_3617_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(4733..5569)
DNA (837bp) protein (279aa)
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:EHN12790.1}; EC=1.1.1.60 {ECO:0000313|EMBL:EHN12790.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
2-hydroxy-3-oxopropionate reductase Tax=Patulibacter medicamentivorans RepID=H0E0Q6_9ACTN
PLM3_60_coex_sep16_scaffold_3617_7
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5742..6257)
DNA (516bp) protein (172aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00036858B1
Uncharacterized protein {ECO:0000313|EMBL:ERF79936.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
protein of unknown function UPF0157
PLM3_60_coex_sep16_scaffold_3617_8
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(7198..7752)
DNA (555bp) protein (185aa)
Uncharacterized protein Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VB74_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ05086.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 7112.;"
PLM3_60_coex_sep16_scaffold_3617_9
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(7851..8198)
DNA (348bp) protein (116aa)
hypothetical protein
id=2098829 bin=GWD2_Chloroflexi_49_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3_60_coex_sep16_scaffold_3617_10
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8337..8543)
DNA (207bp) protein (69aa)
Lactoylglutathione lyase-like lyase Tax=Chamaesiphon minutus PCC 6605 RepID=K9UA61_9CHRO
Glyoxalase {ECO:0000313|EMBL:KFG69807.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
Displaying 10 items

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