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PLM3_60_coex_sep16_scaffold_3987

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3987_1
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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comp(1..348)
DNA (348bp) protein (116aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035D8024
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM3_60_coex_sep16_scaffold_3987_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(368..736)
DNA (369bp) protein (123aa)
Copper resistance protein CopC bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
copper resistance protein CopC
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_3987_3
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(733..1686)
DNA (954bp) protein (318aa)
Uncharacterized protein Tax=Bradyrhizobium sp. STM 3809 RepID=H0T6A1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE01978.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3987_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1737..2252)
DNA (516bp) protein (172aa)
id=4255911 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_coex_sep16_scaffold_3987_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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2430..3404
DNA (975bp) protein (325aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_3987_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3392..5365
DNA (1974bp) protein (658aa)
Cytochrome c, class I bin=GWA2_Methylomirabilis_73_35 species=Nitrosospira multiformis genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
copper resistance D domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_3987_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5365..5739
DNA (375bp) protein (125aa)
Electron transport protein SCO1/SenC bin=GWA2_Methylomirabilis_73_35 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
electron transporter SenC
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_3987_8
unknown

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5736..5972
DNA (237bp) protein (79aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3987_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5969..6568
DNA (600bp) protein (200aa)
Phosphoesterase PA-phosphatase related protein bin=GWA2_Methylomirabilis_73_35 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PA-phosphatase-like phosphoesterase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_3987_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6565..7494)
DNA (930bp) protein (310aa)
LysR family transcriptional regulator bin=GWC2_Methylomirabilis_70_16 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_3987_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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7680..7871
DNA (192bp) protein (64aa)
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_3987_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8186..8857
DNA (672bp) protein (224aa)
aceA; isocitrate lyase (EC:4.1.3.1)
Isocitrate lyase bin=GWC2_Methylomirabilis_70_16 species=Haladaptatus paucihalophilus genus=Haladaptatus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_3987_13
unknown

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comp(8825..9937)
DNA (1113bp) protein (371aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3987_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(10008..11171)
DNA (1164bp) protein (388aa)
Acyl-CoA dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=Streptomyces sp. e14 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_3987_15
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

11267..11674
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZU61_DESOH
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3_60_coex_sep16_scaffold_3987_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11686..12447
DNA (762bp) protein (254aa)
Beta-lactamase family protein bin=GWA2_Methylomirabilis_73_35 species=Thiomicrospira crunogena genus=Thiomicrospira taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
beta-lactamase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_3987_17
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12679..12975
DNA (297bp) protein (99aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW92169.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein; K09990 hypothetical protein bin=bin7_NC10_sister species=Paenibacillus mucilaginosus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Protein of unknown function DUF2086
Displaying 17 items

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