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PLM3_60_coex_sep16_scaffold_21013

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Displaying 3 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_21013_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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45..368
DNA (324bp) protein (108aa)
Two component, sigma54 specific, Fis family transcriptional regulator bin=GWA2_Methylomirabilis_73_35 species=Novosphingobium nitrogenifigens genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Nitrogen assimilation transcription regulatory protein (ntrC)(synonyms:glnT, glnG)
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_21013_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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511..2799
DNA (2289bp) protein (763aa)
General secretion pathway protein E, contains GAF domain bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
gspE2; general secretion pathway protein E
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_21013_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2792..3130)
DNA (339bp) protein (113aa)
Major facilitator superfamily MFS_1 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
arabinose efflux permease family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 3 items

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