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PLM3_60_coex_sep16_scaffold_21013_1

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: 45..368

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, Fis family transcriptional regulator bin=GWA2_Methylomirabilis_73_35 species=Novosphingobium nitrogenifigens genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 76.0
  • Bit_score: 100
  • Evalue 9.60e-19
Nitrogen assimilation transcription regulatory protein (ntrC)(synonyms:glnT, glnG) similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 93.0
  • Bit_score: 74
  • Evalue 1.20e-11
Tax=GWA2_Rokubacteria_73_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 76.0
  • Bit_score: 101
  • Evalue 6.10e-19

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Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGTCAGTCAAGGATGTGATGTCAGTCAACGGCACGGCGGACGACGGCGCGGCGCGGGGCCAGCTCACCAGCCTGGCCCGCGTCGTCGCCGGCGCGGTGCCGATGATGGTCGCTCAGCTCGCGAGCACGCATCCACGCCGGGTATACCGCGAGGCGATGGCCATGATGGAGCGGCCACTGCTCCTGCACGCGCTCAGCCTCACCGGCGGTAACCAGCTCCGCGCCGCCCGCCTGCTCGGCGTCAACCGCAACACGCTGCGCAAGCGGTGTCGCGATCTCGGCCTGGAGCCGTCGCGGCGGCCCGGGCGCGCGGCGACGCCCTAG
PROTEIN sequence
Length: 108
MSVKDVMSVNGTADDGAARGQLTSLARVVAGAVPMMVAQLASTHPRRVYREAMAMMERPLLLHALSLTGGNQLRAARLLGVNRNTLRKRCRDLGLEPSRRPGRAATP*