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PLM3_60_coex_sep16_scaffold_13610

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_13610_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3..1844)
DNA (1842bp) protein (614aa)
DNA polymerase bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA polymerase II
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_13610_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2248..2586
DNA (339bp) protein (113aa)
Dienelactone hydrolase bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dienelactone hydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_13610_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2589..3503
DNA (915bp) protein (305aa)
PDZ/DHR/GLGF domain-containing protein bin=bin7_NC10_sister species=Methylobacterium populi genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
putative serine protease
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_13610_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3592..3807
DNA (216bp) protein (72aa)
Short-chain dehydrogenase/reductase SDR bin=GWF2_Methylomirabilis_70_14 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase/reductase SDR
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_13610_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3891..4319
DNA (429bp) protein (143aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
short-chain dehydrogenase/reductase SDR
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_13610_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4323..5120
DNA (798bp) protein (266aa)
Putative membrane protein bin=GWA2_Methylomirabilis_73_35 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_13610_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5259..6170
DNA (912bp) protein (304aa)
dehydrogenase bin=bin7_NC10_sister species=Bacillus isronensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_13610_8
unknown

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6467..7234
DNA (768bp) protein (256aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_13610_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7318..7632
DNA (315bp) protein (105aa)
phosphodiesterase/alkaline phosphatase D; K01113 alkaline phosphatase D [EC:3.1.3.1] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
metallophosphoesterase
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 9 items

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