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PLM3_60_coex_sep16_scaffold_6881

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_6881_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1..108)
DNA (108bp) protein (36aa)
Chromosome partition protein Smc bin=GWC2_Methylomirabilis_70_24 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
chromosome segregation protein SMC
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_6881_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(216..752)
DNA (537bp) protein (179aa)
hypothetical protein Tax=Leptolyngbya boryana RepID=UPI00036D3E19
N-acetyltransferase GCN5
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_6881_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(795..1199)
DNA (405bp) protein (135aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_6881_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(1208..3850)
DNA (2643bp) protein (881aa)
secA; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
secA; preprotein translocase subunit SecA
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_60_coex_sep16_scaffold_6881_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3894..4877)
DNA (984bp) protein (328aa)
DNA repair and genetic recombination protein bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA replication and repair protein RecN
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_6881_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(5681..6538)
DNA (858bp) protein (286aa)
inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase)(ppnK) (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_6881_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6535..7329)
DNA (795bp) protein (265aa)
rRNA methylase; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
rRNA methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_6881_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7338..8069)
DNA (732bp) protein (244aa)
Putative peptidase, S54 (Rhomboid) family bin=GWC2_Methylomirabilis_70_24 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
peptidase, S54 (Rhomboid) family
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_coex_sep16_scaffold_6881_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8066..9370)
DNA (1305bp) protein (435aa)
processing peptidase (EC:3.4.24.64)
Peptidase M16B family, nonpeptidase-like protein bin=GWA2_Methylomirabilis_73_35 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_6881_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9367..10698)
DNA (1332bp) protein (444aa)
Peptidase M16 domain protein bin=GWA2_Methylomirabilis_73_35 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase M16 domain protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 10 items

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