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PLM3_60_coex_sep16_scaffold_10080

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_10080_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2..220
DNA (219bp) protein (73aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00038095F6
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_10080_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

233..343
DNA (111bp) protein (37aa)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_10080_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

395..1525
DNA (1131bp) protein (377aa)
Sulphate transporter bin=GWF2_Methylomirabilis_70_14 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_10080_4
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1695..3425)
DNA (1731bp) protein (577aa)
cystathionine gamma-synthase (EC:2.5.1.48)
Cystathionine gamma-synthase Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WQM2_RHOS5
Uncharacterized protein {ECO:0000313|EMBL:ETX07414.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3_60_coex_sep16_scaffold_10080_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3422..4681)
DNA (1260bp) protein (420aa)
Major facilitator superfamily MFS_1 bin=GWF2_Methylomirabilis_70_14 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator transporter
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_10080_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5544..6458
DNA (915bp) protein (305aa)
Transcriptional regulator, LysR family bin=GWF2_Methylomirabilis_70_14 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_10080_7
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6468..6797
DNA (330bp) protein (110aa)
Heavy metal-dependent transcription regulator 2 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZDJ0_XANCT
Heavy metal-dependent transcription regulator 2 {ECO:0000313|EMBL:EKU23791.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
MerR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_10080_8
unknown

Not on your lists

6794..7108
DNA (315bp) protein (105aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_10080_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(7068..8246)
DNA (1179bp) protein (393aa)
major facilitator transporter bin=bin7_NC10_sister species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
major facilitator superfamily membrane protein
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_10080_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8378..8809
DNA (432bp) protein (144aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX08390.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
transcriptional regulator bin=bin9_gal15 species=Micrococcus luteus genus=Micrococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
MerR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_10080_11
unknown

Not on your lists

comp(8749..8904)
DNA (156bp) protein (52aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_10080_12
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9527..9910
DNA (384bp) protein (128aa)
Major facilitator superfamily MFS_1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DUN5_9EURY
Major facilitator superfamily (MFS) transporter {ECO:0000313|EMBL:AKF04433.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
arabinose efflux permease family protein
PLM3_60_coex_sep16_scaffold_10080_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9907..10608
DNA (702bp) protein (234aa)
GlcNAc-PI de-N-acetylase family bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
LmbE family protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_10080_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10642..10866)
DNA (225bp) protein (75aa)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 14 items

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