ggKbase home page

PLM3_60_coex_sep16_scaffold_10927

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_10927_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3..152
DNA (150bp) protein (50aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 bin=GWA2_Methylomirabilis_73_35 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_10927_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

162..1526
DNA (1365bp) protein (455aa)
Putative polynucleotide enzyme with nucleotide triphosphate hydrolase domain bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rarA; polynucleotide enzyme with nucleotide triphosphate hydrolase domain
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_10927_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1620..2735
DNA (1116bp) protein (372aa)
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
D-alanine--D-alanine ligase (EC:6.3.2.4)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_10927_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2737..3843
DNA (1107bp) protein (369aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_10927_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4024..4641)
DNA (618bp) protein (206aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_10927_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4669..5640
DNA (972bp) protein (324aa)
ssuA; sulfonate/nitrate/taurine transport system substrate-binding protein bin=bin7_NC10_sister species=Burkholderia sp. WSM4176 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
NMT1-like family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_10927_7
unknown

Not on your lists

comp(5618..5701)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 7 items

View Taxonomy