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PLM3_60_coex_sep16_scaffold_9502

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_9502_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3..686)
DNA (684bp) protein (228aa)
hypothetical protein; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] bin=bin7_NC10_sister species=Aminomonas paucivorans genus=Aminomonas taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=bin7_NC10_sister organism_group=NC10
polynucleotide adenylyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_9502_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(686..1570)
DNA (885bp) protein (295aa)
XerD; site-specific recombinase XerD; K04763 integrase/recombinase XerD bin=bin7_NC10_sister species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
tyrosine recombinase XerD
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_9502_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1653..3248)
DNA (1596bp) protein (532aa)
Integral membrane protein MviN bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
integral membrane protein MviN
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_9502_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists


3323..3574
DNA (252bp) protein (84aa)
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
30S ribosomal protein S20
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_9502_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3586..4812)
DNA (1227bp) protein (409aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_9502_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4809..5825)
DNA (1017bp) protein (339aa)
Putative DNA polymerase III, delta subunit bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Eggerthella taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA polymerase III subunit delta
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_9502_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(5848..6348)
DNA (501bp) protein (167aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_9502_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


comp(6348..8918)
DNA (2571bp) protein (857aa)
Leucine--tRNA ligase bin=GWF2_Methylomirabilis_70_14 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
leuS; leucyl-tRNA ligase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_9502_9
unknown

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comp(9011..9079)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 9 items

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