ggKbase home page

PLM3_60_coex_sep16_scaffold_11789

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_11789_1
unknown

Not on your lists

comp(3..86)
DNA (84bp) protein (28aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_11789_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(292..1425)
DNA (1134bp) protein (378aa)
Major facilitator superfamily MFS_1 bin=GWC2_Methylomirabilis_70_16 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
major facilitator superfamily protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_coex_sep16_scaffold_11789_3
unknown

Not on your lists

1482..1649
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_11789_4
unknown

Not on your lists

1689..1871
DNA (183bp) protein (61aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_11789_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1847..2521)
DNA (675bp) protein (225aa)
Dienelactone hydrolase-like enzyme bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Dienelactone hydrolase family
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_11789_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2553..3812)
DNA (1260bp) protein (420aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_11789_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3809..5086)
DNA (1278bp) protein (426aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_11789_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5083..6036)
DNA (954bp) protein (318aa)
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_11789_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6033..6620)
DNA (588bp) protein (196aa)
Glutamine amidotransferase of anthranilate synthase bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glutamine amidotransferase of anthranilate synthase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_11789_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6617..8074)
DNA (1458bp) protein (486aa)
anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
anthranilate synthase component I (EC:4.1.3.27)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_11789_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8177..8509)
DNA (333bp) protein (111aa)
Thioredoxin bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
trxA; thioredoxin 1, redox factor
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_11789_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8643..8981
DNA (339bp) protein (113aa)
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWC2_Methylomirabilis_70_16 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 12 items

View Taxonomy