ggKbase home page

PLM3_60_coex_sep16_scaffold_5014

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_5014_1
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

3..161
DNA (159bp) protein (53aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] bin=bin7_NC10_sister species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM3_60_coex_sep16_scaffold_5014_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

158..787
DNA (630bp) protein (210aa)
Imidazole glycerol phosphate synthase subunit HisH bin=GWC2_Methylomirabilis_70_24 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
imidazole glycerol phosphate synthase subunit hisH
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_5014_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

784..1566
DNA (783bp) protein (261aa)
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase bin=bin7_NC10_sister species=Acinetobacter nectaris genus=Acinetobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_5014_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1566..2378
DNA (813bp) protein (271aa)
hisF; imidazole glycerol phosphate synthase cyclase subunit (EC:4.1.3.-); K02500 cyclase [EC:4.1.3.-] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hisF; imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_5014_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2375..3049
DNA (675bp) protein (225aa)
hisIE; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC:3.5.4.19 3.6.1.31)
Histidine biosynthesis bifunctional protein hisIE bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_5014_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3057..3569
DNA (513bp) protein (171aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_5014_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3573..4334
DNA (762bp) protein (254aa)
yrbE; toluene ABC transporter subunit membrane protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
yrbE; toluene ABC transporter subunit membrane protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_5014_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4334..5134
DNA (801bp) protein (267aa)
ABC transporter; K02065 putative ABC transport system ATP-binding protein bin=bin7_NC10_sister species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
ABC transporter
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_5014_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5131..6354
DNA (1224bp) protein (408aa)
Mce family protein bin=GWA2_Methylomirabilis_73_35 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Mce family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_5014_10
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

6357..7163
DNA (807bp) protein (269aa)
DNA repair protein RadA bin=bin9_gal15 species=Bacillus sp. AP8 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
XRE family transcriptional regulator
Tax=CSP1_3_Armatimonadetes
Displaying 10 items

View Taxonomy