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PLM3_60_coex_sep16_scaffold_5026

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_5026_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3..608)
DNA (606bp) protein (202aa)
Putative Fibronectin, type III bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fibronectin type III domain-containing protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_5026_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(734..2173)
DNA (1440bp) protein (480aa)
Argininosuccinate lyase bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
argininosuccinate lyase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_5026_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2170..2838)
DNA (669bp) protein (223aa)
1-acyl-sn-glycerol-3-phosphate acyltransferases bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
1-acyl-sn-glycerol-3-phosphate acyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_5026_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(2911..3480)
DNA (570bp) protein (190aa)
signAl transduction histidine kinase containing a receiver domain bin=bin7_NC10_sister species=Thermus scotoductus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_5026_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3492..4484)
DNA (993bp) protein (331aa)
aminodeoxychorismate lyase bin=bin7_NC10_sister species=Thermodesulfatator atlanticus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin7_NC10_sister organism_group=NC10
aminodeoxychorismate lyase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_5026_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4637..5650
DNA (1014bp) protein (338aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_5026_7
unknown

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5664..6029
DNA (366bp) protein (122aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_5026_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6432..7154)
DNA (723bp) protein (241aa)
diaminopimelate aminotransferase (EC:2.6.1.83)
L,L-diaminopimelate aminotransferase bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 8 items

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