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PLM3_60_coex_sep16_scaffold_5321

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_5321_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2..193
DNA (192bp) protein (64aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
carboxymuconolactone decarboxylase family protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_5321_2
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

216..1517
DNA (1302bp) protein (434aa)
Amidohydrolase 2 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GUR6_SPHAL
Uncharacterized protein {ECO:0000313|EMBL:ETX07382.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
amidohydrolase 2
PLM3_60_coex_sep16_scaffold_5321_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1566..1805
DNA (240bp) protein (80aa)
id=4736658 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_coex_sep16_scaffold_5321_4
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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1925..2080
DNA (156bp) protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW94666.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3_60_coex_sep16_scaffold_5321_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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2091..2507
DNA (417bp) protein (139aa)
putative ferredoxin-thioredoxin reductase, catalytic subunit (EC:1.18.-.-)
Putative Ferredoxin-thioredoxin reductase, catalytic subunit {ECO:0000313|EMBL:CBK43249.1}; EC=1.18.-.- {ECO:0000313|EMBL:CBK43249.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Putative Ferredoxin-thioredoxin reductase, catalytic subunit Tax=Candidatus Nitrospira defluvii RepID=D8PJ12_9BACT
PLM3_60_coex_sep16_scaffold_5321_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2580..3017
DNA (438bp) protein (146aa)
Endoribonuclease L-PSP bin=GWA2_Methylomirabilis_73_35 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
endoribonuclease L-PSP
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_5321_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3017..3661
DNA (645bp) protein (215aa)
id=4852964 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_5321_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3813..4037
DNA (225bp) protein (75aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_5321_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(4254..4514)
DNA (261bp) protein (87aa)
Transcriptional regulatory protein SrrA Tax=SAR86 cluster bacterium SAR86A RepID=J5K7Y8_9GAMM
two component transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_5321_10
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4514..5491)
DNA (978bp) protein (326aa)
Metal-dependent hydrolase, beta-lactamase superfamily I Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9P7N2_CYAGP
beta-lactamase superfamily metal-dependent hydrolase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM3_60_coex_sep16_scaffold_5321_11
GWB2_Elusimicrobia_63_16_curated, Elusimicrobia, Bacteria

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comp(5653..8442)
DNA (2790bp) protein (930aa)
putative hybrid histidine kinase (EC:2.7.13.3)
PAS sensor protein bin=GWB2_Elusimicrobia_63_16 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
Tax=GWB2_Elusimicrobia_63_16_curated
PLM3_60_coex_sep16_scaffold_5321_12
unknown

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8598..8777
DNA (180bp) protein (60aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_5321_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(8899..9099)
DNA (201bp) protein (67aa)
AMP-dependent synthetase and ligase bin=GWA2_Methylomirabilis_73_35 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative long-chain-fatty-acid CoA ligase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_5321_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9104..10378)
DNA (1275bp) protein (425aa)
putative fatty-acid--CoA ligase (EC:6.2.1.-)
AMP-dependent synthetase and ligase bin=GWA2_Methylomirabilis_73_35 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_coex_sep16_scaffold_5321_15
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

10433..12202
DNA (1770bp) protein (590aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XFZ2_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3_60_coex_sep16_scaffold_5321_16
Enterobacter sp. 638, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12227..12565
DNA (339bp) protein (113aa)
Putative copper efflux system periplasmic protein CusF Tax=Enterobacter sp. (strain 638) RepID=A4W805_ENT38
copper efflux system periplasmic protein CusF
Putative copper efflux system periplasmic protein CusF {ECO:0000313|EMBL:ABP59835.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. (strain 638).;"
PLM3_60_coex_sep16_scaffold_5321_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12569..13447)
DNA (879bp) protein (293aa)
Alpha/beta hydrolase fold protein bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
haloalkane dehalogenase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_5321_18
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

13588..14439
DNA (852bp) protein (284aa)
Tax=RBG_13_Acidobacteria_68_16_curated
PLM3_60_coex_sep16_scaffold_5321_19
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(14501..15892)
DNA (1392bp) protein (464aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z2E6_METPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI62868.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
Displaying 19 items

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