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PLM3_60_coex_sep16_scaffold_5721

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_5721_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1..789)
DNA (789bp) protein (263aa)
coproporphyrinogen III oxidase, anaerobic (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] bin=bin7_NC10_sister species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
oxygen-independent coproporphyrinogen III oxidase (yggW) (EC:1.3.99.22)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_5721_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(816..1589)
DNA (774bp) protein (258aa)
Signal peptidase I bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
lepB; signal peptidase I
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_5721_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1594..3384)
DNA (1791bp) protein (597aa)
Elongation factor 4 bin=GWC2_Methylomirabilis_70_24 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GTP-binding protein LepA
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_5721_4
unknown

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comp(3453..3593)
DNA (141bp) protein (47aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_5721_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3590..4369)
DNA (780bp) protein (260aa)
Nucleotidyl transferase bin=GWC2_Methylomirabilis_70_16 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
nucleotidyl transferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_5721_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4450..4620)
DNA (171bp) protein (57aa)
hypothetical protein; K09791 hypothetical protein bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_5721_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(4652..5587)
DNA (936bp) protein (312aa)
NAD-dependent epimerase/dehydratase bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NAD-dependent epimerase/dehydratase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_5721_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(5620..6936)
DNA (1317bp) protein (439aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_5721_9
unknown

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comp(7034..7240)
DNA (207bp) protein (69aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_5721_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(7337..8131)
DNA (795bp) protein (265aa)
Putative CtaG protein bin=GWA2_Methylomirabilis_73_35 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_5721_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8136..8429)
DNA (294bp) protein (98aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_5721_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8426..10186)
DNA (1761bp) protein (587aa)
ctaD; cytochrome c oxidase subunit 1 (EC:1.9.3.1)
Cytochrome c oxidase, subunit I bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 12 items

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