ggKbase home page

PLM3_60_coex_sep16_scaffold_5929

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_5929_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3..383
DNA (381bp) protein (127aa)
AMP-dependent synthetase and ligase bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl-CoA synthetase/AMP-acid ligase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_5929_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

619..831
DNA (213bp) protein (71aa)
ThiS bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sulfur carrier protein ThiS
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_5929_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

882..1664
DNA (783bp) protein (261aa)
Thiazole synthase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
thiazole synthase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_5929_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1652..2269
DNA (618bp) protein (206aa)
Thiamine-phosphate synthase bin=GWA2_Methylomirabilis_73_35 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tenI; carboxythiazole phosphate tautomerase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_5929_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2364..3236)
DNA (873bp) protein (291aa)
Two-component hybrid sensor and regulator bin=GWA2_Methylomirabilis_73_35 species=Azospirillum sp. genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
two-component hybrid sensor and regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_5929_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3269..4597
DNA (1329bp) protein (443aa)
Amidohydrolase bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_5929_7
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4637..5863)
DNA (1227bp) protein (409aa)
Phosphoesterase, PA-phosphatase related protein Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CZ6_POLSJ
PA-phosphatase-like protein phosphoesterase
Phosphoesterase, PA-phosphatase related protein {ECO:0000313|EMBL:ABE43596.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
PLM3_60_coex_sep16_scaffold_5929_8
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5894..7039)
DNA (1146bp) protein (382aa)
Acyl-CoA dehydrogenase Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RA11_PHEZH
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ACG79515.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
Displaying 8 items

View Taxonomy