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PLM3_60_coex_sep16_scaffold_28983

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_28983_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3..485)
DNA (483bp) protein (161aa)
hemC; hypothetical protein (EC:2.5.1.61)
Porphobilinogen deaminase bin=GWA2_Methylomirabilis_73_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_28983_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(482..1753)
DNA (1272bp) protein (424aa)
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase bin=GWA2_Methylomirabilis_73_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_28983_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1753..2556)
DNA (804bp) protein (268aa)
ResC/HemX-like cytochrome c biogenesis membrane protein bin=GWA2_Methylomirabilis_73_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ResC/HemX-like cytochrome c biogenesis membrane protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_28983_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2584..3378)
DNA (795bp) protein (265aa)
Uncharacterized protein involved in formate dehydrogenase formation-like protein bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
formate dehydrogenase formation protein FdhE, putative
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_28983_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3395..4330)
DNA (936bp) protein (312aa)
Polysulfide reductase NrfD; K04015 protein NrfD bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
Polysulfide reductase NrfD
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_60_coex_sep16_scaffold_28983_6
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(4347..5084)
DNA (738bp) protein (246aa)
4Fe-4S ferredoxin; K00124 formate dehydrogenase, beta subunit bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
4Fe-4S ferredoxin
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM3_60_coex_sep16_scaffold_28983_7
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(5103..5441)
DNA (339bp) protein (113aa)
formate dehydrogenase subunit alpha (EC:1.7.99.4); K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] bin=bin7_NC10_sister species=Thermodesulfobacterium geofontis genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin7_NC10_sister organism_group=NC10
Nitrate reductase (EC:1.7.99.4)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Displaying 7 items

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