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PLM3_60_coex_sep16_scaffold_4123

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4123_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3..1430)
DNA (1428bp) protein (476aa)
Putative permease bin=GWA2_Methylomirabilis_73_35 species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lptF; lipopolysaccharide ABC transporter membrane protein LptF
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4123_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1474..2523
DNA (1050bp) protein (350aa)
Valine--tRNA ligase bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4123_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2537..5173
DNA (2637bp) protein (879aa)
Valine--tRNA ligase bin=GWC2_Methylomirabilis_70_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
valS; valyl-tRNA ligase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_4123_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5170..5889
DNA (720bp) protein (240aa)
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
Biotin operon repressor and biotin--acetyl-CoA carboxylase ligase bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4123_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5892..6662
DNA (771bp) protein (257aa)
Type III pantothenate kinase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Baf family transcriptional activator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4123_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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6791..7951
DNA (1161bp) protein (387aa)
IMP dehydrogenase family protein bin=GWA2_Methylomirabilis_73_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
guaB; IMP dehydrogenase/GMP reductase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 6 items

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