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PLM3_60_coex_sep16_scaffold_4163

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4163_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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113..1441
DNA (1329bp) protein (443aa)
Uncharacterized protein Tax=Burkholderia terrae BS001 RepID=I5CGS8_9BURK
family 3 adenylate cyclase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4163_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2286..3482
DNA (1197bp) protein (399aa)
L-carnitine dehydratase/bile acid-inducible protein F bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
CaiB/BaiF family protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_4163_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

3927..4148
DNA (222bp) protein (74aa)
Uncharacterized protein Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0CNH1_9BACL
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_4163_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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4261..5835
DNA (1575bp) protein (525aa)
2-isopropylmalate synthase/homocitrate synthase family protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cimA; citramalate synthase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_4163_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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5832..6218
DNA (387bp) protein (129aa)
response regulator receiver protein bin=bin7_NC10_sister species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
response regulator receiver protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_4163_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(6241..6708)
DNA (468bp) protein (156aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_4163_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(6973..7650)
DNA (678bp) protein (226aa)
Probable transferase protein bin=GWC2_Methylomirabilis_70_24 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative transferase protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_4163_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(7673..8317)
DNA (645bp) protein (215aa)
Tetratricopeptide TPR_2 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_4163_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8314..9297)
DNA (984bp) protein (328aa)
Kelch repeat-containing protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Kelch repeat-containing protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_4163_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9319..11337)
DNA (2019bp) protein (673aa)
ligA; DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) (EC:6.5.1.2)
DNA ligase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHF2_9BACT
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_4163_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(11634..11864)
DNA (231bp) protein (77aa)
Binding-protein-dependent transport system inner membrane protein bin=GWC2_Methylomirabilis_70_24 species=gamma proteobacterium BDW918 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
iron ABC transporter permease
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 11 items

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