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PLM3_60_coex_sep16_scaffold_4192

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4192_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3..1217
DNA (1215bp) protein (405aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_4192_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1214..1537
DNA (324bp) protein (108aa)
Cupin domain protein bin=GWA2_Methylomirabilis_73_35 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cupin 2 barrel domain-containing protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_4192_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1856..2131
DNA (276bp) protein (92aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ykgE; putative hydroxyacid oxidoreductase (Fe-S centre)
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_4192_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2128..3549
DNA (1422bp) protein (474aa)
(4Fe-4S) cluster-containing protein bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Iron-sulfur cluster binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4192_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3546..4295
DNA (750bp) protein (250aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_4192_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4288..4689
DNA (402bp) protein (134aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4192_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4689..5435
DNA (747bp) protein (249aa)
HAD superfamily (Subfamily IA) hydrolase, TIGR02254 bin=GWA2_Methylomirabilis_73_35 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
HAD-superfamily hydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4192_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5489..6427
DNA (939bp) protein (313aa)
Thioredoxin reductase bin=GWA2_Methylomirabilis_73_35 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thioredoxin reductase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4192_9
bacterium UASB270, Bacteria

Not on your lists

6434..7057
DNA (624bp) protein (208aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0002FD7C03
Uncharacterized protein {ECO:0000313|EMBL:GAK56988.1}; species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_4192_10
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(7105..7692)
DNA (588bp) protein (196aa)
Methyltransferase type 11 Tax=Pelosinus fermentans RepID=I8RGL0_9FIRM
Methyltransferase type 11 {ECO:0000313|EMBL:EIW18788.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
methyltransferase
PLM3_60_coex_sep16_scaffold_4192_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(7728..8555)
DNA (828bp) protein (276aa)
Probable L-aspartate dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative L-aspartate dehydrogenase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_4192_12
unknown

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comp(8695..8958)
DNA (264bp) protein (88aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4192_13
unknown

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comp(9121..9357)
DNA (237bp) protein (79aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4192_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9399..9974
DNA (576bp) protein (192aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4192_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9967..11355
DNA (1389bp) protein (463aa)
Conserved uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4192_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11402..11551
DNA (150bp) protein (50aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 16 items

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