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PLM3_60_coex_sep16_scaffold_4214

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4214_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1..1374
DNA (1374bp) protein (458aa)
transcriptional regulator bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Mg chelatase subunit ChlI
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4214_2
unknown

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1504..1785
DNA (282bp) protein (94aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4214_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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1865..2086
DNA (222bp) protein (74aa)
Isochorismatase hydrolase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
isochorismatase hydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_4214_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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2086..2511
DNA (426bp) protein (142aa)
hypothetical protein bin=bin7_NC10_sister species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_4214_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2530..3213)
DNA (684bp) protein (228aa)
Lytic transglycosylase, catalytic bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lytic transglycosylase catalytic subunit
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4214_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3307..5700)
DNA (2394bp) protein (798aa)
ATP-dependent proteinase. Serine peptidase. MEROPS family S16 (EC:3.4.21.53) bin=bin7_NC10_sister species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin7_NC10_sister organism_group=NC10
ATP-dependent proteinase. Serine peptidase. MEROPS family S16 (EC:3.4.21.53)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4214_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(5717..6103)
DNA (387bp) protein (129aa)
Transcriptional regulator bin=GWA2_Methylomirabilis_73_35 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4214_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(6100..6744)
DNA (645bp) protein (215aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Zn finger domain-containing DnaJ-class molecular chaperone
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4214_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6750..8666)
DNA (1917bp) protein (639aa)
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_4214_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(8796..9242)
DNA (447bp) protein (149aa)
Heat shock protein Hsp20 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Heat shock protein Hsp20
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_4214_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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9397..9822
DNA (426bp) protein (142aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_4214_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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9892..10692
DNA (801bp) protein (267aa)
Protein mazG bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
protein mazG
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_4214_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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10689..11225
DNA (537bp) protein (179aa)
Predicted phosphatase bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphatase, C-terminal domain of histone macro H2A1 like protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_4214_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11235..12974
DNA (1740bp) protein (580aa)
Type IV-A pilus assembly ATPase PilB bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
type IV-A pilus assembly ATPase PilB
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4214_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12983..14191
DNA (1209bp) protein (403aa)
Type 4 fimbrial assembly protein pilC bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
type II secretion system F domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4214_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14212..15822
DNA (1611bp) protein (537aa)
multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
Putative Multi-sensor signal transduction histidine kinase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4214_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15815..17215
DNA (1401bp) protein (467aa)
pilR; regulator protein pilR; K02667 two-component system, NtrC family, response regulator PilR bin=bin7_NC10_sister species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
pilR; transcriptional regulatory protein pilR
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 17 items

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