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PLM3_60_coex_sep16_scaffold_4447

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4447_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3..1397)
DNA (1395bp) protein (465aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4447_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(1529..2020)
DNA (492bp) protein (164aa)
Transcriptional regulator, HxlR family Tax=Chthoniobacter flavus Ellin428 RepID=B4D1Y7_9BACT
HxlR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_4447_3
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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2042..3418
DNA (1377bp) protein (459aa)
Putative efflux protein, MATE family Tax=Acidovorax sp. CF316 RepID=J1EKY2_9BURK
mate efflux family protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM3_60_coex_sep16_scaffold_4447_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3427..3864
DNA (438bp) protein (146aa)
hypothetical protein bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_4447_5
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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3911..5209
DNA (1299bp) protein (433aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS94_RUBXD
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ABG05734.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_4447_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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5206..5865
DNA (660bp) protein (220aa)
XRE family transcriptional regulator bin=bin7_NC10_sister species=Brevibacillus panacihumi genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
XRE family transcriptional regulator
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_4447_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5870..6910)
DNA (1041bp) protein (347aa)
methylthioribose-1-phosphate isomerase (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4447_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6929..7204)
DNA (276bp) protein (92aa)
hypothetical protein; K09131 hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4447_9
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(7201..7671)
DNA (471bp) protein (157aa)
DivIVA domain protein bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Displaying 9 items

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