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PLM3_60_coex_sep16_scaffold_2328

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2328_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2..898
DNA (897bp) protein (299aa)
Putative thiamine pyrophosphate enzyme TPP binding domain protein bin=GWC2_Methylomirabilis_70_16 species=Microcystis sp. T1-4 genus=Microcystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
thiamine pyrophosphate TPP-binding domain-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_coex_sep16_scaffold_2328_2
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1056..3032
DNA (1977bp) protein (659aa)
Peptidase S8 and S53 subtilisin kexin sedolisin Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7L3G6_METC4
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ACK86374.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;"
PLM3_60_coex_sep16_scaffold_2328_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3044..4348
DNA (1305bp) protein (435aa)
Putative uncharacterized protein Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q217T4_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD87352.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PLM3_60_coex_sep16_scaffold_2328_4
unknown

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4396..4827
DNA (432bp) protein (144aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2328_5
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4895..5800)
DNA (906bp) protein (302aa)
Uricase (Urate oxidase) Tax=Caenispirillum salinarum AK4 RepID=K9GU57_9PROT
Uricase (Urate oxidase) {ECO:0000313|EMBL:EKV28682.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
polysaccharide deacetylase
PLM3_60_coex_sep16_scaffold_2328_6
Bacillus subtilis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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5972..7114
DNA (1143bp) protein (381aa)
Putative ureidoglycolate lyase Tax=Bacillus atrophaeus C89 RepID=I4XGC8_BACAT
ureidoglycolate lyase
Purine catabolism protein PucG {ECO:0000313|EMBL:KFK82544.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subtilis subsp. niger.;"
PLM3_60_coex_sep16_scaffold_2328_7
unknown

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comp(7101..7364)
DNA (264bp) protein (88aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2328_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(7529..8974)
DNA (1446bp) protein (482aa)
Amidase bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_2328_9
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9008..9811)
DNA (804bp) protein (268aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003631046
Uncharacterized protein {ECO:0000313|EMBL:KGN29167.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
binding-protein-dependent transporters inner membrane component
PLM3_60_coex_sep16_scaffold_2328_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9831..10646)
DNA (816bp) protein (272aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037DEFA5
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:EXG80075.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
binding-protein-dependent transporters inner membrane component
PLM3_60_coex_sep16_scaffold_2328_11
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(10720..11955)
DNA (1236bp) protein (412aa)
Putative ABC transporter substrate-binding protein Tax=Austwickia chelonae NBRC 105200 RepID=K6ULN7_9MICO
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:EXG80074.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
family 1 extracellular solute-binding protein
PLM3_60_coex_sep16_scaffold_2328_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(11952..13133)
DNA (1182bp) protein (394aa)
Selenocysteine lyase / isopenicillin N epimerase bin=GWF2_Methylomirabilis_70_14 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
isopenicillin N-epimerase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_2328_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(13130..13501)
DNA (372bp) protein (124aa)
isopropylmalate/isohomocitrate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 13 items

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