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PLM3_60_coex_sep16_scaffold_1411

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1411_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..1969
DNA (1968bp) protein (656aa)
Chromosome partition protein Smc bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
chromosome segregation protein SMC
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_1411_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2030..2920
DNA (891bp) protein (297aa)
Transcriptional regulator, XRE family bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_1411_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2940..3863
DNA (924bp) protein (308aa)
Signal recognition particle receptor FtsY bin=GWA2_Methylomirabilis_73_35 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ftsY; signal recognition particle-docking protein ftsy
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_1411_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3860..4957
DNA (1098bp) protein (366aa)
5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_1411_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4957..5559
DNA (603bp) protein (201aa)
Riboflavin synthase alpha chain (Fragment) bin=GWA2_Methylomirabilis_73_35 species=Heliobacillus mobilis genus=Heliobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ribE; riboflavin synthase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_1411_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5556..6767
DNA (1212bp) protein (404aa)
ribBA; riboflavin biosynthesis protein RibBA (EC:4.1.99.12 3.5.4.25)
Riboflavin biosynthesis protein RibBA bin=GWF2_Methylomirabilis_70_14 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_1411_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6769..7365
DNA (597bp) protein (199aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_1411_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7367..7786
DNA (420bp) protein (140aa)
N utilization substance protein B homolog bin=GWA2_Methylomirabilis_73_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NusB antitermination factor
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_1411_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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7800..8525
DNA (726bp) protein (242aa)
Metallophosphoesterase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
metallophosphoesterase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_1411_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8531..10048
DNA (1518bp) protein (506aa)
Apolipoprotein N-acyltransferase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lnt-1; apolipoprotein N-acyltransferase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_1411_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10148..11140
DNA (993bp) protein (331aa)
Peptide chain release factor 2 bin=GWA2_Methylomirabilis_73_35 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_1411_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11137..12624
DNA (1488bp) protein (496aa)
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase bin=GWF2_Methylomirabilis_70_14 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_1411_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12621..13787
DNA (1167bp) protein (389aa)
lolC; Lipoprotein releasing system, transmembrane protein, LolC/E family bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
lolC; Lipoprotein releasing system, transmembrane protein, LolC/E family
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 13 items

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