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PLM3_60_coex_sep16_scaffold_1439

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1439_1
unknown

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3..107
DNA (105bp) protein (35aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1439_2
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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163..621
DNA (459bp) protein (153aa)
Putative pyridoxamine 5'-phosphate oxidase FMN-binding protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICX7_NITGG
putative FMN-binding pyridoxamine 5'-phosphate oxidase
Putative FMN-binding pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:AIC15237.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_60_coex_sep16_scaffold_1439_3
unknown

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775..1008
DNA (234bp) protein (78aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1439_4
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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1063..1368
DNA (306bp) protein (102aa)
Putative uncharacterized protein Tax=Burkholderia xenovorans (strain LB400) RepID=Q13GF9_BURXL
Uncharacterized protein {ECO:0000313|EMBL:ETX04464.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
antibiotic biosynthesis monooxygenase family protein
PLM3_60_coex_sep16_scaffold_1439_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(1439..3574)
DNA (2136bp) protein (712aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PHI7_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_coex_sep16_scaffold_1439_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3868..5022
DNA (1155bp) protein (385aa)
Glycosyl hydrolase, family 88 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. CCGE-LA001 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_1439_7
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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5121..6185
DNA (1065bp) protein (355aa)
Oxidoreductase domain protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D0V7_9BACT
oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM3_60_coex_sep16_scaffold_1439_8
Thermosynechococcus sp. NK55a, Thermosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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6205..7443
DNA (1239bp) protein (413aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI000362E427
ABC-type sugar uptake system substrate-binding component
ABC-type sugar uptake system substrate-binding component {ECO:0000313|EMBL:AHB88925.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Thermosynechococcus.;" source="Thermosynechococcus sp. NK55a.;"
PLM3_60_coex_sep16_scaffold_1439_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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7460..8350
DNA (891bp) protein (297aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00036C2DEB
sugar ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_60_coex_sep16_scaffold_1439_10
Virgibacillus sp. SK37, Virgibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8337..9149
DNA (813bp) protein (271aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00037F9685
lactose ABC transporter permease
Lactose ABC transporter permease {ECO:0000313|EMBL:AIF44422.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Virgibacillus.;" source="Virgibacillus sp. SK37.;"
PLM3_60_coex_sep16_scaffold_1439_11
unknown

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9146..9502
DNA (357bp) protein (119aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00036995A4
PLM3_60_coex_sep16_scaffold_1439_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9720..10499
DNA (780bp) protein (260aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX02557.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
ABC transporter related protein bin=GWC2_Methylomirabilis_70_24 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
livG2; high-affinity branched-chain amino acid transporter ATP-binding protein LivG
PLM3_60_coex_sep16_scaffold_1439_13
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10528..11211
DNA (684bp) protein (228aa)
ABC transporter, ATP-binding protein Tax=Roseburia RepID=C0FPP3_9FIRM
Amino acid ABC transporter ATPase {ECO:0000313|EMBL:ETW99231.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-)
PLM3_60_coex_sep16_scaffold_1439_14
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11232..12425
DNA (1194bp) protein (398aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX02559.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Putative branched chain amino acid ABC transporter substrate-binding protein bin=GWC2_Methylomirabilis_70_24 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
extracellular ligand-binding receptor
PLM3_60_coex_sep16_scaffold_1439_15
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12445..13320
DNA (876bp) protein (292aa)
Inner-membrane translocator Tax=Rhodopseudomonas palustris RepID=B3QJ81_RHOPT
Uncharacterized protein {ECO:0000313|EMBL:ETX02560.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
ABC transporter permease
PLM3_60_coex_sep16_scaffold_1439_16
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13328..14215
DNA (888bp) protein (296aa)
ABC transporter permease Tax=Geovibrio thiophilus RepID=UPI0003B538ED
inner-membrane translocator
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM3_60_coex_sep16_scaffold_1439_17
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14265..14675)
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Paenibacillus RepID=F5LQD5_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGL15384.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF7.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1439_18
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14907..15167
DNA (261bp) protein (87aa)
histidine kinase Tax=Acidovorax radicis RepID=UPI0002375EFF
PAS/PAC sensor hybrid histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
PLM3_60_coex_sep16_scaffold_1439_19
RBG_16_RIF05_58_8_curated, RIF5, Bacteria

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15169..15414
DNA (246bp) protein (82aa)
Histidine kinase bin=GWA2_Methylomirabilis_73_35 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative two-component system response regulator
Tax=RBG_16_RIF05_58_8_curated
Displaying 19 items

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