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PLM3_60_coex_sep16_scaffold_1515

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1515_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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3..392
DNA (390bp) protein (130aa)
Putative dioxygenase, 2OG-Fe(II) oxygenase superfamily protein Tax=alpha proteobacterium BAL199 RepID=A8TMT8_9PROT
2OG-Fe(II) oxygenase superfamily protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_1515_2
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(418..1614)
DNA (1197bp) protein (399aa)
Arabinose efflux permease family protein Tax=Acidovorax sp. CF316 RepID=J0KM79_9BURK
MFS transporter {ECO:0000313|EMBL:KJB97160.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
major facilitator protein
PLM3_60_coex_sep16_scaffold_1515_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1625..1954)
DNA (330bp) protein (110aa)
carboxymuconolactone decarboxylase (EC:1.11.1.15)
Carboxymuconolactone decarboxylase Tax=Burkholderia cepacia GG4 RepID=J7J6R3_BURCE
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_60_coex_sep16_scaffold_1515_4
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2077..2628)
DNA (552bp) protein (184aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000379DFF2
Uncharacterized protein {ECO:0000313|EMBL:ETW97626.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
luciferase-like protein
PLM3_60_coex_sep16_scaffold_1515_5
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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2921..3979
DNA (1059bp) protein (353aa)
6-phosphogluconolactonase (EC:3.1.1.31)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036C709D
Uncharacterized protein {ECO:0000313|EMBL:ETX06093.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3_60_coex_sep16_scaffold_1515_6
unknown

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comp(4347..4703)
DNA (357bp) protein (119aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1515_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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4979..5824
DNA (846bp) protein (282aa)
taurine dioxygenase (EC:1.14.11.17)
Taurine catabolic dioxygenase protein Tax=Ralstonia sp. PBA RepID=I9KXB5_9RALS
Uncharacterized protein {ECO:0000313|EMBL:ETW94503.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3_60_coex_sep16_scaffold_1515_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5853..6695
DNA (843bp) protein (281aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035F4987
amidohydrolase 2
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_60_coex_sep16_scaffold_1515_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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6715..7152
DNA (438bp) protein (146aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase Tax=Bacillus RepID=U5LDI6_9BACI
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_60_coex_sep16_scaffold_1515_10
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7188..8480
DNA (1293bp) protein (431aa)
Monooxygenase Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89Q17_BRADU
Monooxygenase {ECO:0000313|EMBL:BAR60539.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
monooxygenase
PLM3_60_coex_sep16_scaffold_1515_11
unknown

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comp(8488..8586)
DNA (99bp) protein (33aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1515_12
unknown

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comp(8641..8973)
DNA (333bp) protein (111aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1515_13
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9169..9609
DNA (441bp) protein (147aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8TWI2_9PROT
Cupin {ECO:0000313|EMBL:KAJ02710.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter mediterraneus.;"
cupin 2 domain-containing protein
PLM3_60_coex_sep16_scaffold_1515_14
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9657..12812
DNA (3156bp) protein (1052aa)
Adenylate cyclase Tax=Patulibacter medicamentivorans RepID=H0E0D2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGM43975.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
adenylate/guanylate cyclase
PLM3_60_coex_sep16_scaffold_1515_15
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12896..13276
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Pseudomonas alcaligenes OT 69 RepID=U3HA33_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:EQM67605.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes OT 69.;"
dehydrogenase
Displaying 15 items

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