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PLM3_60_coex_sep16_scaffold_1743

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1743_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..289
DNA (288bp) protein (96aa)
tesA; Esterase TesA (EC:3.1.1.1)
GDSL-like Lipase/Acylhydrolase bin=GWA2_Methylomirabilis_73_35 species=Magnetospirillum gryphiswaldense genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_1743_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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559..1071
DNA (513bp) protein (171aa)
N-terminal methylation site bin=GWC2_Methylomirabilis_70_24 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Type IV pilus biogenesis protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_1743_3
unknown

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1068..1229
DNA (162bp) protein (54aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1743_4
unknown

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1232..1447
DNA (216bp) protein (72aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1743_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1444..2010
DNA (567bp) protein (189aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_coex_sep16_scaffold_1743_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2022..2726
DNA (705bp) protein (235aa)
id=4383526 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_1743_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2744..4087
DNA (1344bp) protein (448aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_1743_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4389..5615
DNA (1227bp) protein (409aa)
id=4736661 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_coex_sep16_scaffold_1743_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(5612..8269)
DNA (2658bp) protein (886aa)
Lytic transglycosylase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lytic transglycosylase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_1743_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(8269..10947)
DNA (2679bp) protein (893aa)
uridylyltransferase bin=GWF2_Methylomirabilis_70_14 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glnD; nitrogen regulatory protein P-II uridylyltransferase, GlnD
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_1743_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11086..12168
DNA (1083bp) protein (361aa)
hisC4; histidinol-phosphate transaminase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_1743_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12179..12619
DNA (441bp) protein (147aa)
Endoribonuclease L-PSP bin=GWA2_Methylomirabilis_73_35 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
translation initiation inhibitor
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_1743_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12621..13283
DNA (663bp) protein (221aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
2-hydroxy-3-oxopropionate reductase bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 13 items

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