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PLM3_60_coex_sep16_scaffold_7834

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_7834_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3..314
DNA (312bp) protein (104aa)
DNA polymerase bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA polymerase B region
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_7834_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(351..683)
DNA (333bp) protein (111aa)
RNP-1 like RNA-binding protein bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RNP-1 like RNA-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_7834_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(802..1413)
DNA (612bp) protein (204aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_7834_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1516..2094)
DNA (579bp) protein (193aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_7834_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2094..2645)
DNA (552bp) protein (184aa)
RDD domain containing protein bin=GWA2_Methylomirabilis_73_35 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
membrane protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_7834_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2648..3853
DNA (1206bp) protein (402aa)
Molybdenum cofactor synthesis domain protein bin=GWC2_Methylomirabilis_70_16 species=Thioalkalivibrio thiocyanoxidans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
molybdopterin-guanine dinucleotide biosynthesis protein B
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_7834_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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3853..5418
DNA (1566bp) protein (522aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_7834_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5421..5690
DNA (270bp) protein (90aa)
UPF0176 protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_7834_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

5706..5843
DNA (138bp) protein (46aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_7834_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6029..6805
DNA (777bp) protein (259aa)
id=14627849 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 10 items

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