ggKbase home page

PLM3_60_coex_sep16_scaffold_1229_1

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(3..221)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component bin=GWC2_Methylomirabilis_70_16 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 72.0
  • Bit_score: 81
  • Evalue 2.40e-13
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 55.0
  • Bit_score: 53
  • Evalue 2.60e-05
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 64.0
  • Bit_score: 82
  • Evalue 1.50e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 219
ATGGCCGTAGTCGCGCTCCCCGACGCGGCGCCCATCGAGCGGCGCGAGTGGCTGGTGTTCCTGCGCCGCCTGGCCGCACGGCGCACCGCGCTGTTCGGCCTCGTCGTCGTGGCGGTGGTCGTGCTGACCGCGGTGGGCGCGCCGCTGATCTCCCCGTTCGATCCGATCGAGCAGGACCTCGGCGACCTGCGCCTGAAGGCGCCGGGGTTCCGCGACGCC
PROTEIN sequence
Length: 73
MAVVALPDAAPIERREWLVFLRRLAARRTALFGLVVVAVVVLTAVGAPLISPFDPIEQDLGDLRLKAPGFRDA