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PLM3_60_coex_sep16_scaffold_1122_9

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(10678..11607)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 307.0
  • Bit_score: 299
  • Evalue 6.80e-79
pseudouridine synthase bin=GWC2_Methylomirabilis_70_24 species=Sporolactobacillus inulinus genus=Sporolactobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 303.0
  • Bit_score: 357
  • Evalue 1.30e-95
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 305.0
  • Bit_score: 443
  • Evalue 2.50e-121

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 930
GTGCGACGCGTGGATTTGGTGGTCGACGCCCCCGCCGCCGGCGAGCGCCTCGATCGCTGGCTGGCGGCCCGCGTCCCCGGCCTCTCCCGCGCACGCCTGCAGGCGCTGATCGCCGGCGGCCACGTGCGTGTGAGCGGCCTGGCGCGCAAACCCTCGCACCGGGTGGTGGCGGGGGAGCGGATCGACGTGGAGATCCCGCCGCTGCCACCCGAGGAGCTCGAGCCGGAGCCGATCGCGCTCAGCGTGGTCCACGAGGACGAGCAGGTGCTGGTGCTCGACAAGCCGGCCGGCGTCGTGGTCCATCCCGGGGCCGGTCACGCACGCGGCACCCTGGCGGCGGCCGTCCTCGCCCATGCGCCCGGCACCGCCGGCGTCGGCGGCCCGCGCCGCCCCGGCGTCGTGCACCGACTCGACAAGGACACCTCGGGACTGCTCGTCATGGCCAAGACGCCGCTGGCTTACGAGTCGCTCACCGCCCAGCTGGTCGCGCGCACCGTGCGGCGCGTGTATCTCGCCCTGGCGCACGGCCGCGTGGGGCCGGCCGAGGGTGTGATCGACAAACCGATCGGTCGCGATCCGCGTGACCGCAAGCGGATGGCCGTGCGGCCGCTCGGGCAGGGGCGCCGATCGGTGACCAATTTTCGCGTGCTCGAGCGCCTCGGCGATTTCACCTATCTGGAGGCGCGCCTGCAGACCGGCCGGACCCACCAGATCCGAGTTCACCTGGCCAGCCTGGGACACCCGATCGCTGGCGACGAGGTCTACGGCGGCCGGCGCCGAGGACCGCTGCCGGTGCCGCTCGAAGGCCTGGCGTTGCACGCCACGGCCCTGGCCTTCGTGCACCCGGTTACCCAGAAGCGGATGGAGTTCGCTTCAGCGCTGCCACCCCGGATCGAGCACCTGCTGTCTCACTTGCGCCACGCCCGCTAG
PROTEIN sequence
Length: 310
VRRVDLVVDAPAAGERLDRWLAARVPGLSRARLQALIAGGHVRVSGLARKPSHRVVAGERIDVEIPPLPPEELEPEPIALSVVHEDEQVLVLDKPAGVVVHPGAGHARGTLAAAVLAHAPGTAGVGGPRRPGVVHRLDKDTSGLLVMAKTPLAYESLTAQLVARTVRRVYLALAHGRVGPAEGVIDKPIGRDPRDRKRMAVRPLGQGRRSVTNFRVLERLGDFTYLEARLQTGRTHQIRVHLASLGHPIAGDEVYGGRRRGPLPVPLEGLALHATALAFVHPVTQKRMEFASALPPRIEHLLSHLRHAR*