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PLM3_60_coex_sep16_scaffold_1122

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1122_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2..955)
DNA (954bp) protein (318aa)
gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) (EC:6.3.5.-) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) (EC:6.3.5.-)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_1122_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1091..2551)
DNA (1461bp) protein (487aa)
aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_1122_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2561..2848)
DNA (288bp) protein (96aa)
gatC; glutamyl-tRNA(Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_60_coex_sep16_scaffold_1122_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2928..5090)
DNA (2163bp) protein (721aa)
uvrD; DNA helicase II (EC:3.6.1.-)
DNA helicase II bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_1122_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

5233..5622
DNA (390bp) protein (130aa)
cetoacetate metabolism regulatory protein atoC bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_1122_6
GWA1_OD1_51_12, Parcubacteria, Bacteria

Not on your lists

comp(5609..6331)
DNA (723bp) protein (241aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW21681.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_51_12.;"
PLM3_60_coex_sep16_scaffold_1122_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6480..8321)
DNA (1842bp) protein (614aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glutamine amidotransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_1122_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8341..10566)
DNA (2226bp) protein (742aa)
UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.157 2.7.7.23)
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase bin=GWC2_Methylomirabilis_70_24 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_1122_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10678..11607)
DNA (930bp) protein (310aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
pseudouridine synthase bin=GWC2_Methylomirabilis_70_24 species=Sporolactobacillus inulinus genus=Sporolactobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_1122_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(11610..12089)
DNA (480bp) protein (160aa)
Lipoprotein signal peptidase bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_1122_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12086..14914)
DNA (2829bp) protein (943aa)
Isoleucine--tRNA ligase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ileS; isoleucyl-tRNA synthetase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_1122_12
unknown

Not on your lists

comp(14954..15196)
DNA (243bp) protein (81aa)

This feature has no annotations

Displaying 12 items

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