ggKbase home page

PLM3_60_coex_sep16_scaffold_3505_6

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(3524..5056)

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide ABC transpoter oligopeptide-binding protein bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 512.0
  • Bit_score: 338
  • Evalue 7.70e-90
family 5 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 505.0
  • Bit_score: 303
  • Evalue 5.90e-80
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 39.6
  • Coverage: 512.0
  • Bit_score: 338
  • Evalue 1.10e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1533
ATGACGACCGCGTGGACCCGCCGCCGTTTTCTCGCCGTGACCGCCGCCGGCGCGACTGCCGCCGCCACCCGCCCCGCCGCCGCCCAGAGCCGGATGCAGCTCGTGATTTCCTCGCCGGCCGACGCCACCACGATGGACCCCGGCCGCTCGACCCAGGTGCTGACCGTCAACTACTTCGCCAATCTCTACGACACGCTCACCCGCTGGGACACCTCGCTCAAGCTGCAGCCGGGCCTGGCCACCGCCTGGAAGAGCGTCAACGACACGACGTGGGAGATCACGCTGCGCGAGGGCGTCAAGTTCCACGACGGCACGCCGCTCACCGCCGCCGACGTCAAGGCCGTCTATGAGCGCAACCTCGACCGCGGCAAGACGGTGGTGACGGCCGGCTTCGCGACGATCGAGGCCGTGCAGGCGACGGGGCCGACCAGCCTCCGGATCTCCACCAAGAAGCCGGACCCGCTGATGCCGGTGCGCATGGCCCAGATGGGCGGCTACATCTATCCGGCGCGCTACGCCACTGACGACGGCGCCAAGGAGCTGGCGCGCAAGCCGGTCGGCACCGGCGCCTACCGGTTCGTCGAGTGGGTGAAGGACGACCGGCTGGTGATGGACGCCAATCAGGAGTGGTGGGGCTGGGGCGGCAAGCCGCCGGCGATCGACCGGCTGATCTGGAAGCCGATCCCCGACGACTTCGCGCGCCTCTCGGCCCTGCAGCGGGGCGAGGTGGACGTCATCACCAACGTGCCGCCCGACCAGATGAAGATCGTCCGCACGCTCACCGTGCCCGCCACGCGCACGGTGACCTTCTGGATCAACACCACCCAGCCGCCGCTGTCCGACAAGCGCGTCCGCCAGGCGCTGCACTACGCGATGGACACGGCCTCGATCGTCAAGAACCTCTACGCGGGGCAGGGCAAGCCGTTCAGCGGGGGCCTGGCCGACACCGACTTCGGCTACAACGCCGAGCTCAAGCCCTATCCCTACGATCCCGAGCGCGCCCGGAAGCTGCTGGCCGAGGCCGGTGTCGGCGGCGGCTTCGACGTCACCCTCTACGCGGGCAGCGGCACGATGGTCAACGACAAGCAGTTACTGGAAGTCATCGCCGACATGTGGTCGAAGGTCGGCGTCCGCGCCAGGGTCGAGATGATGGAGATGGCCGCCCGCCAGAAGATGAACAACGACCGGACGGTGCCGCCCCACGGGCTGATGCTCATCAACCCGCAGTCGACGCTGCTCGACGCCGACGGCAGCATGTGGCGCCTCTTCCATCCCAGCGGCTTCGGCGGCAAGTACTGGGTGGGCAGCCAGCCCGGCCAGCGCTTCCACGACGTGATGGAGCAGGCGCGCTACACGCTCGATCCGAAAAAGCGCAAGGAGCTCTACACCGAGGCCACGCGCATCATCCACGAGGACAAGCCGTGGCTGGAGCTGTTCCAGGAGGTGGTCATCTACGGCGTGAGCAAGCGCGTGTCGTTCAAGCCGCGGGCGGACTACCGGCTGGTCGCGGCCGAGATGACGCTCGCGCGCTGA
PROTEIN sequence
Length: 511
MTTAWTRRRFLAVTAAGATAAATRPAAAQSRMQLVISSPADATTMDPGRSTQVLTVNYFANLYDTLTRWDTSLKLQPGLATAWKSVNDTTWEITLREGVKFHDGTPLTAADVKAVYERNLDRGKTVVTAGFATIEAVQATGPTSLRISTKKPDPLMPVRMAQMGGYIYPARYATDDGAKELARKPVGTGAYRFVEWVKDDRLVMDANQEWWGWGGKPPAIDRLIWKPIPDDFARLSALQRGEVDVITNVPPDQMKIVRTLTVPATRTVTFWINTTQPPLSDKRVRQALHYAMDTASIVKNLYAGQGKPFSGGLADTDFGYNAELKPYPYDPERARKLLAEAGVGGGFDVTLYAGSGTMVNDKQLLEVIADMWSKVGVRARVEMMEMAARQKMNNDRTVPPHGLMLINPQSTLLDADGSMWRLFHPSGFGGKYWVGSQPGQRFHDVMEQARYTLDPKKRKELYTEATRIIHEDKPWLELFQEVVIYGVSKRVSFKPRADYRLVAAEMTLAR*