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PLM3_60_coex_sep16_scaffold_3505

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3505_1
unknown

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comp(3..107)
DNA (105bp) protein (35aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3505_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(187..1506)
DNA (1320bp) protein (440aa)
Ribosomal protein S12 methylthiotransferase RimO bin=GWF2_Methylomirabilis_70_14 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MiaB; 2-methylthioadenine synthetase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_3505_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1553..2050)
DNA (498bp) protein (166aa)
hypothetical protein; K09767 hypothetical protein bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
yajQ; nucleotide-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_3505_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2066..2773)
DNA (708bp) protein (236aa)
Outer membrane lipoprotein carrier protein LolA bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Outer-membrane lipoprotein carrier protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_3505_5
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

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comp(2816..3505)
DNA (690bp) protein (230aa)
hypothetical protein
Leucyl/phenylalanyl-tRNA--protein transferase bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_13_Spirochaetes_68_11_curated
PLM3_60_coex_sep16_scaffold_3505_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3524..5056)
DNA (1533bp) protein (511aa)
Oligopeptide ABC transpoter oligopeptide-binding protein bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 5 extracellular solute-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_3505_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5053..5934)
DNA (882bp) protein (294aa)
Binding-protein-dependent transport systems inner membrane component bin=GWC2_Methylomirabilis_70_24 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
binding-protein-dependent transporters inner membrane component
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_3505_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5927..6844)
DNA (918bp) protein (306aa)
Dipeptide transport system permease DppB bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dppB; dipeptide transport system permease DppB
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_3505_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6871..7629)
DNA (759bp) protein (253aa)
NAD-dependent epimerase/dehydratase bin=GWA2_Methylomirabilis_73_35 species=Burkholderia graminis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NAD-dependent epimerase/dehydratase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_3505_10
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7747..8661)
DNA (915bp) protein (305aa)
Dioxygenase Tax=Streptomyces hygroscopicus subsp. jinggangensis (strain 5008) RepID=H2K6F6_STRHJ
dioxygenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_60_coex_sep16_scaffold_3505_11
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8821..9567
DNA (747bp) protein (249aa)
Extracellular ligand-binding receptor bin=GWC2_Syntrophus__56_31 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
substrate-binding periplasmic protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
Displaying 11 items

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