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PLM3_60_coex_sep16_scaffold_5350_8

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(6248..6778)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin7_NC10_sister species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 170.0
  • Bit_score: 179
  • Evalue 2.70e-42
ECF family RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 166.0
  • Bit_score: 111
  • Evalue 1.90e-22
Tax=CSP1_6_Rokubacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 170.0
  • Bit_score: 179
  • Evalue 3.80e-42

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Taxonomy

CSP1_6_Rokubacteria → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGGATGAGGCAACGTTTACCCGAGTGGCCGAGGAGTATGCTGGCCGCCTCTATTCGGTGGCCTATCGCCTGCTCGGCAACCGCGCCGACGCGGAGGACGCGGTGCAGCGCGCGCTGCTCAAGTGCTTCGCGGCCCGCGCGAGCTACTCGCCGCGCTGGGCGGTGTCGACGTGGCTCTATCGCGCACTCACGAACGTCTGCATCGACGAGCTGCGCCGCCGCCGGGTCCGGAACGAGGCCTCCGACGGGAATCTGGAGGCGGGATCGGGCGACGTTGCGCCGGAACGCGAACCGGGGAGGAGAGGGCGGGAGACGTCGAGCGTCGACCGCGTCGACCTCACGCGCGCGCTGGAAATCGTCCCCCGCGAGGCGCGGATGCTCCTCGCGCTGCACTATGTCGACGGGCTCGGCTACAGCGAGCTGGCGAAGATCCGTGGGATCTCGATCAACACGGTGAAGAGCCAGCTCAGGCGCGGCAAGGCCATCTTGAAGAAGGCGCTGCAGGCAGGAGGACACGATGGATCGGACTGA
PROTEIN sequence
Length: 177
MDEATFTRVAEEYAGRLYSVAYRLLGNRADAEDAVQRALLKCFAARASYSPRWAVSTWLYRALTNVCIDELRRRRVRNEASDGNLEAGSGDVAPEREPGRRGRETSSVDRVDLTRALEIVPREARMLLALHYVDGLGYSELAKIRGISINTVKSQLRRGKAILKKALQAGGHDGSD*