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PLM3_60_coex_sep16_scaffold_12971

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_12971_trna_3
unknown

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comp(89..160)
DNA (72bp)
transferRNA Val
PLM3_60_coex_sep16_scaffold_12971_trna_2
unknown

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comp(185..262)
DNA (78bp)
transferRNA Cys
PLM3_60_coex_sep16_scaffold_12971_trna_1
unknown

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comp(314..386)
DNA (73bp)
transferRNA Gly
PLM3_60_coex_sep16_scaffold_12971_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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554..1150
DNA (597bp) protein (199aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY24_PSEUX
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEA24265.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM3_60_coex_sep16_scaffold_12971_2
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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1135..1941
DNA (807bp) protein (269aa)
Putative transmembrane anti-sigma factor Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S9J9_GEOOG
Anti-sigma factor {ECO:0000313|EMBL:KGH44558.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
putative transmembrane anti-sigma factor
PLM3_60_coex_sep16_scaffold_12971_3
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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2116..2832
DNA (717bp) protein (239aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
Multi-sensor signal transduction histidine kinase Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AXT5_HERA2
multi-sensor signal transduction histidine kinase
PLM3_60_coex_sep16_scaffold_12971_4
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2833..3522
DNA (690bp) protein (230aa)
LuxR family transcriptional regulator Tax=Streptomyces sp. HmicA12 RepID=UPI00036640C7
Two-component system response regulator {ECO:0000313|EMBL:EDY59242.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
two-component system response regulator
PLM3_60_coex_sep16_scaffold_12971_5
unknown

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3681..4160
DNA (480bp) protein (160aa)

This feature has no annotations

Displaying 8 items

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