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PLM3_60_coex_sep16_scaffold_3116

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3116_1
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..330)
DNA (330bp) protein (110aa)
apolipoprotein N- acyltransferase Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003737B55
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ADU47602.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
PLM3_60_coex_sep16_scaffold_3116_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(332..664)
DNA (333bp) protein (111aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI0003658675
Uncharacterized protein {ECO:0000313|EMBL:EXG79431.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3116_3
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(956..1186)
DNA (231bp) protein (77aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Probable dehydrogenase/oxidase Tax=Janibacter sp. HTCC2649 RepID=A3TQC0_9MICO
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein {ECO:0000313|EMBL:EXG79430.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM3_60_coex_sep16_scaffold_3116_4
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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1414..3531
DNA (2118bp) protein (706aa)
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_60_coex_sep16_scaffold_3116_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3423..3959)
DNA (537bp) protein (179aa)
(2Fe-2S)-binding domain protein Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QEA1_CATAD
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein {ECO:0000313|EMBL:EXG79429.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
(2Fe-2S)-binding domain-containing protein
PLM3_60_coex_sep16_scaffold_3116_6
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3956..4843)
DNA (888bp) protein (296aa)
Molybdopterin dehydrogenase FAD-binding protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y365_THEBD
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein {ECO:0000313|EMBL:EXG79428.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
molybdopterin dehydrogenase FAD-binding protein
PLM3_60_coex_sep16_scaffold_3116_7
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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4938..5843
DNA (906bp) protein (302aa)
hypothetical protein Tax=Actinomadura flavalba RepID=UPI00037D92F4
Membrane-bound lytic murein transglycosylase F
Membrane-bound lytic murein transglycosylase F {ECO:0000313|EMBL:AEV82721.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM3_60_coex_sep16_scaffold_3116_8
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5866..6813
DNA (948bp) protein (316aa)
Polar amino acid ABC transporter, inner membrane subunit Tax=Micromonospora RepID=D9T5Z3_MICAI
polar amino acid ABC transporter inner membrane subunit
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADL47898.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM3_60_coex_sep16_scaffold_3116_9
Streptomyces sp. Tu 6176, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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6803..7609
DNA (807bp) protein (269aa)
ABC transporter Tax=Streptomyces sp. PsTaAH-124 RepID=UPI0003635FE0
Arginine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EYT83967.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu 6176.;"
ABC transporter
PLM3_60_coex_sep16_scaffold_3116_10
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(7650..8879)
DNA (1230bp) protein (410aa)
transposase IS605 Tax=Actinomadura atramentaria RepID=UPI0003637E84
Putative transposase in snaA-snaB intergenic region
Putative transposase in snaA-snaB intergenic region {ECO:0000313|EMBL:CCK25033.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM3_60_coex_sep16_scaffold_3116_11
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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8889..9236
DNA (348bp) protein (116aa)
transposase Tax=Rhodococcus ruber RepID=UPI00036C952A
transposase
Transposase {ECO:0000313|EMBL:CDZ88728.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber.;"
PLM3_60_coex_sep16_scaffold_3116_12
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9266..9586)
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AXV9_STRRD
Uncharacterized protein {ECO:0000313|EMBL:ETK30573.1}; Flags: Fragment;; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3116_13
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

9661..10413
DNA (753bp) protein (251aa)
DNA polymerase beta domain protein region Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VNK5_9CYAN
DNA polymerase beta domain protein region
DNA polymerase beta domain protein region {ECO:0000313|EMBL:AFZ09129.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 7112.;"
PLM3_60_coex_sep16_scaffold_3116_14
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10454..11650)
DNA (1197bp) protein (399aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00037ACEB4
putative aldehyde dehydrogenase
Putative aldehyde dehydrogenase {ECO:0000313|EMBL:BAL90832.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM3_60_coex_sep16_scaffold_3116_15
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11683..13428
DNA (1746bp) protein (582aa)
Putative membrane protein Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82R39_STRAW
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:BAC68014.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
PLM3_60_coex_sep16_scaffold_3116_16
unknown

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13484..13987
DNA (504bp) protein (168aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3116_17
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13984..14814
DNA (831bp) protein (277aa)
Amidohydrolase Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3QAG0_STANL
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ADD42743.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
Displaying 17 items

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