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PLM3_60_coex_sep16_scaffold_6345

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_6345_1
unknown

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comp(1..297)
DNA (297bp) protein (99aa)
hypothetical protein
PLM3_60_coex_sep16_scaffold_6345_2
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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387..650
DNA (264bp) protein (88aa)
Uncharacterized protein Tax=Mycobacterium RepID=A1UES5_MYCSK
Uncharacterized protein {ECO:0000313|EMBL:CDO10780.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_6345_3
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

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704..1963
DNA (1260bp) protein (420aa)
Major facilitator superfamily MFS_1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BY60_BEUC1
major facilitator superfamily protein
Tax=GWC2_Nitrospirae_57_9_curated
PLM3_60_coex_sep16_scaffold_6345_4
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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2022..2636
DNA (615bp) protein (205aa)
Regulatory protein TetR Tax=Frankia sp. CN3 RepID=G6H7R4_9ACTO
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KJE25210.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
putative TetR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_6345_5
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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2718..5081
DNA (2364bp) protein (788aa)
Putative uncharacterized protein Tax=Streptomyces zinciresistens K42 RepID=G2GIL3_9ACTO
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_66_13_curated
PLM3_60_coex_sep16_scaffold_6345_6
Streptomyces griseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5152..6174)
DNA (1023bp) protein (341aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003778914
Uncharacterized protein {ECO:0000313|EMBL:KIX50788.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseus.;"
putative integral membrane protein
PLM3_60_coex_sep16_scaffold_6345_7
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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6210..6770
DNA (561bp) protein (187aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036F6F33
TetR family transcriptional regulator
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:ACZ90405.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_6345_8
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6856..7380)
DNA (525bp) protein (175aa)
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI0003600C91
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:KJK35061.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_6345_9
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7420..8049)
DNA (630bp) protein (210aa)
Putative transcriptional regulator, TetR family Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BAI4_STRRD
TetR family transcriptional regulator
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:ACZ89814.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_6345_10
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8236..9894)
DNA (1659bp) protein (553aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
phosphoenolpyruvate-protein phosphotransferase Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627E94
ptsA; phosphoenolpyruvate--protein phosphotransferase
PLM3_60_coex_sep16_scaffold_6345_11
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9897..10172)
DNA (276bp) protein (92aa)
phosphotransferase Tax=Amycolatopsis RepID=UPI0002627E93
ptsH; phosphotransferase system, phosphocarrier protein HPr
Phosphotransferase system, phosphocarrier protein HPr {ECO:0000313|EMBL:AIJ24953.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM3_60_coex_sep16_scaffold_6345_12
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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10352..11443
DNA (1092bp) protein (364aa)
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase Tax=Actinomadura madurae LIID-AJ290 RepID=U2P792_9ACTO
Glutamine--fructose-6-phosphate aminotransferase {ECO:0000313|EMBL:ETK33569.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
PLM3_60_coex_sep16_scaffold_6345_13
R_OP11_Woesebacteria_39_13, Woesebacteria, Microgenomates, Bacteria

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comp(11451..13193)
DNA (1743bp) protein (581aa)
putative spermidine synthase with an N-terminal membrane domain
Putative spermidine synthase with an N-terminal membrane domain bin=GWA2_Elusimicrobia_69_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RIFCSPHIGHO2_02_FULL_OP11_Woesebacteria_39_13_curated
Displaying 13 items

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