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PLM3_60_coex_sep16_scaffold_5231

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_5231_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(3..1013)
DNA (1011bp) protein (337aa)
Cell division protein FtsW Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AXQ7_FRADG
cell division protein FtsW
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5231_2
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1000..2469)
DNA (1470bp) protein (490aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoylalanine--D-glutamate ligase; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase Tax=Frankia alni (strain ACN14a) RepID=Q0RNP3_FRAAA
PLM3_60_coex_sep16_scaffold_5231_3
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2462..3535)
DNA (1074bp) protein (358aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000255|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000255|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00038}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase Tax=Frankia sp. (strain CcI3) RepID=MRAY_FRASC
PLM3_60_coex_sep16_scaffold_5231_4
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3535..3723)
DNA (189bp) protein (63aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BKV9_MYCCN
PLM3_60_coex_sep16_scaffold_5231_5
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(3723..4793)
DNA (1071bp) protein (357aa)
murF; putative UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136, ECO:0000313|EMBL:CCG03122.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RTR2_BLASD
PLM3_60_coex_sep16_scaffold_5231_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(4790..6277)
DNA (1488bp) protein (496aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2C5_CONWI
UDP-N-acetylmuramyl tripeptide synthetase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5231_7
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6386..8044)
DNA (1659bp) protein (553aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:AEH10426.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AEH10426.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
Peptidoglycan glycosyltransferase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AYC3_FRADG
PLM3_60_coex_sep16_scaffold_5231_8
Streptomyces xiamenensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(8207..8704)
DNA (498bp) protein (166aa)
Septum formation initiator Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=E2PZS2_STRC2
S-adenosyl-L-methionine-dependent methyltransferase MraW {ECO:0000313|EMBL:AKG42415.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiamenensis.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_5231_9
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8701..9681)
DNA (981bp) protein (327aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036F7C80
S-adenosyl-methyltransferase MraW
PLM3_60_coex_sep16_scaffold_5231_10
Rothia dentocariosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9684..10082)
DNA (399bp) protein (133aa)
Protein MraZ Tax=Rothia dentocariosa RepID=E3H0V2_ROTDC
mraZ; cell division protein MraZ
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia dentocariosa M567.;"
PLM3_60_coex_sep16_scaffold_5231_11
unknown

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comp(10306..10623)
DNA (318bp) protein (106aa)

This feature has no annotations

Displaying 11 items

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