ggKbase home page

PLM3_60_coex_sep16_scaffold_2370

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2370_1
unknown

Not on your lists

3..263
DNA (261bp) protein (87aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2370_2
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(229..588)
DNA (360bp) protein (120aa)
sulfite oxidase (EC:1.8.3.1)
Oxidoreductase molybdopterin binding Tax=Micromonospora lupini str. Lupac 08 RepID=I0KYC9_9ACTO
Oxidoreductase molybdopterin binding {ECO:0000313|EMBL:CCH16576.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
PLM3_60_coex_sep16_scaffold_2370_3
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(651..1943)
DNA (1293bp) protein (431aa)
Putative molybdopterin oxidoreductase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RWP8_BLASD
putative molybdopterin oxidoreductase
Putative molybdopterin oxidoreductase {ECO:0000313|EMBL:CCG04669.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM3_60_coex_sep16_scaffold_2370_4
Pontibacillus yanchengensis, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2190..3506
DNA (1317bp) protein (439aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00035C0E72
Uncharacterized protein {ECO:0000313|EMBL:KGP74619.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus yanchengensis Y32.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2370_5
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3544..4167
DNA (624bp) protein (208aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00035C57E2
Peptidase C60, sortase A and B {ECO:0000313|EMBL:EOD69081.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2370_6
Streptomyces pratensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4209..5399
DNA (1191bp) protein (397aa)
Integral membrane protein Tax=Streptomyces flavogriseus (strain ATCC 33331 / DSM 40990 / IAF-45CD) RepID=E8WBH1_STRFA
hypothetical protein
Integral membrane protein {ECO:0000313|EMBL:ADW02214.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pratensis (strain ATCC 33331 / IAF-45CD).;"
PLM3_60_coex_sep16_scaffold_2370_7
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5401..6759)
DNA (1359bp) protein (453aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase Tax=Cystobacter fuscus DSM 2262 RepID=S9NST7_9DELT
PLM3_60_coex_sep16_scaffold_2370_8
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6831..7433)
DNA (603bp) protein (201aa)
Transcriptional regulator, TetR family Tax=Sorangium cellulosum (strain So ce56) RepID=A9GYI9_SORC5
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHY45991.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3_60_coex_sep16_scaffold_2370_9
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

7521..9158
DNA (1638bp) protein (546aa)
AMP-dependent synthetase and ligase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3Q7_CONWI
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II {ECO:0000313|EMBL:AHY45992.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3_60_coex_sep16_scaffold_2370_10
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9065..10033)
DNA (969bp) protein (323aa)
Predicted membrane protein Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BHC7_SANKS
hypothetical protein
Predicted membrane protein {ECO:0000313|EMBL:ACZ21847.1}; species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
PLM3_60_coex_sep16_scaffold_2370_11
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10125..11186)
DNA (1062bp) protein (354aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI0003622CD1
Oxidoreductase {ECO:0000313|EMBL:KHD74343.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
SCBAC17A6.23; oxidoreductase
PLM3_60_coex_sep16_scaffold_2370_12
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11252..12058
DNA (807bp) protein (269aa)
hypothetical protein Tax=Streptomyces sp. CNQ766 RepID=UPI00036A2088
Xylose isomerase {ECO:0000313|EMBL:KIF66063.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
xylose isomerase domain-containing protein
PLM3_60_coex_sep16_scaffold_2370_13
Paenibacillus sp. FSL R5-808, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12066..12785)
DNA (720bp) protein (240aa)
Oxidoreductase domain protein Tax=Paenibacillus vortex V453 RepID=E5YNU3_9BACL
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:ETT38287.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-808.;"
oxidoreductase
Displaying 13 items

View Taxonomy