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PLM3_60_coex_sep16_scaffold_7888

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_7888_trna_2
unknown

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comp(15..87)
DNA (73bp)
transferRNA Glu
PLM3_60_coex_sep16_scaffold_7888_1
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(117..581)
DNA (465bp) protein (155aa)
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B56662
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK53869.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_7888_trna_1
unknown

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comp(645..716)
DNA (72bp)
transferRNA Gln
PLM3_60_coex_sep16_scaffold_7888_2
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(776..2293)
DNA (1518bp) protein (506aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
Glutamate--tRNA ligase Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q0S8_KRIFD
glutamyl-tRNA synthetase
PLM3_60_coex_sep16_scaffold_7888_3
Streptomyces cyaneogriseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2341..3411
DNA (1071bp) protein (357aa)
Glycosyl transferase, group 1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LR55_ACIC1
glycosyltransferase
Streptomyces cyaneogriseus subsp. noncyanogenus strain NMWT 1, complete genome {ECO:0000313|EMBL:AJP04455.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cyaneogriseus subsp. noncyanogenus.;"
PLM3_60_coex_sep16_scaffold_7888_4
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3420..4187)
DNA (768bp) protein (256aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
5-carboxymethyl-2-hydroxymuconateDelta-isomerase {ECO:0000313|EMBL:ACY99073.1}; EC=5.3.3.10 {ECO:0000313|EMBL:ACY99073.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase Tax=Actinomadura flavalba RepID=UPI000370519C
PLM3_60_coex_sep16_scaffold_7888_5
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4191..5228)
DNA (1038bp) protein (346aa)
chalcone synthase Tax=Saccharopolyspora spinosa RepID=UPI000237AD0A
Chalcone synthase {ECO:0000313|EMBL:KJK46841.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
chalcone and stilbene synthase domain-containing protein
PLM3_60_coex_sep16_scaffold_7888_6
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5225..5554)
DNA (330bp) protein (110aa)
Ubiquinone biosynthesis O-methyltransferase Tax=Acidovorax sp. CF316 RepID=J0KUV7_9BURK
Methyltransferase {ECO:0000313|EMBL:EWC64606.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
ubiG; 3-demethylubiquinone-9 3-methyltransferase
PLM3_60_coex_sep16_scaffold_7888_7
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5966..7183)
DNA (1218bp) protein (406aa)
Acyl-CoA dehydrogenase, short-chain specific {ECO:0000313|EMBL:EWC64604.1}; EC=1.3.8.1 {ECO:0000313|EMBL:EWC64604.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
Acyl-CoA dehydrogenase domain protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLN7_9CHLR
acyl-CoA dehydrogenase
PLM3_60_coex_sep16_scaffold_7888_8
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7493..8167
DNA (675bp) protein (225aa)
hypothetical protein Tax=Streptomyces RepID=UPI00037F366F
GCN5 family acetyltransferase {ECO:0000313|EMBL:AKH86470.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_7888_9
RBG_19FT_COMBO_Chloroflexi_49_13_curated, Chloroflexi, Bacteria

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8400..8699
DNA (300bp) protein (100aa)
hypothetical protein Tax=Frankia sp. BCU110501 RepID=UPI00036F8947
type 11 methyltransferase
Tax=RBG_19FT_COMBO_Chloroflexi_49_13_curated
Displaying 11 items

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