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PLM3_60_coex_sep16_scaffold_40538

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_40538_1
unknown

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comp(2..106)
DNA (105bp) protein (35aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_40538_2
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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188..1096
DNA (909bp) protein (303aa)
Putative permease, DMT superfamily Tax=Saccharomonospora cyanea NA-134 RepID=H5XPX6_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EME63002.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
putative permease, DMT superfamily
PLM3_60_coex_sep16_scaffold_40538_3
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1116..1754)
DNA (639bp) protein (213aa)
Lysine exporter (LYSE/YGGA) Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G5R1_9GAMM
Lysine exporter (LYSE/YGGA) {ECO:0000313|EMBL:EHQ53148.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
lysine exporter protein LysE/YggA
PLM3_60_coex_sep16_scaffold_40538_4
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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1827..3032
DNA (1206bp) protein (402aa)
2-oxo-acid dehydrogenase E1 subunit, homodimeric type (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
Pyruvate dehydrogenase E1 component Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B294_FRADG
PLM3_60_coex_sep16_scaffold_40538_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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2981..4549
DNA (1569bp) protein (523aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Pyruvate dehydrogenase E1 component Tax=Frankia sp. (strain EuI1c) RepID=E3JCR2_FRASU
2-oxo-acid dehydrogenase E1 subunit, homodimeric type
PLM3_60_coex_sep16_scaffold_40538_6
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4559..4996)
DNA (438bp) protein (146aa)
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00202, ECO:0000256|SAAS:SAAS00231155}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00202};; IPP:DMAPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
Isopentenyl-diphosphate Delta-isomerase Tax=Frankia sp. QA3 RepID=I8QYD3_9ACTO
PLM3_60_coex_sep16_scaffold_40538_7
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5084..6181)
DNA (1098bp) protein (366aa)
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10)
Aminomethyltransferase {ECO:0000255|HAMAP-Rule:MF_00259}; EC=2.1.2.10 {ECO:0000255|HAMAP-Rule:MF_00259};; Glycine cleavage system T protein {ECO:0000255|HAMAP-Rule:MF_00259}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
Aminomethyltransferase Tax=Frankia alni (strain ACN14a) RepID=GCST_FRAAA
PLM3_60_coex_sep16_scaffold_40538_8
unknown

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comp(6178..6297)
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 8 items

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